Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AP001269.3-201ENST00000588718 329 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AC005261.5-201ENST00000596280 355 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AC091057.3-201ENST00000602684 733 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AC107075.1-201ENST00000613695 314 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 PCMTD1P7-201ENST00000634506 357 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCNA1P78396 MIR1284-201ENST00000408337 120 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 RNU4-22P-201ENST00000411058 166 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 MTND1P23-201ENST00000416931 372 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.26□□□□□ -2.05
CCNA1P78396 AC010153.1-201ENST00000432862 727 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 AC007327.1-201ENST00000447461 264 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 TPT1P14-201ENST00000448018 505 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 ZNF886P-201ENST00000450781 723 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 MTND2P39-201ENST00000457230 764 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.26□□□□□ -2.05
CCNA1P78396 RNA5SP233-201ENST00000459153 113 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 AC104564.1-201ENST00000493028 407 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 MTND3P3-201ENST00000505004 126 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.26□□□□□ -2.05
CCNA1P78396 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.26□□□□□ -2.05
CCNA1P78396 RN7SKP258-201ENST00000517151 304 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
CCNA1P78396 AC023538.1-201ENST00000534576 736 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.26□□□□□ -2.05
CCNA1P78396 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.26□□□□□ -2.05
CCNA1P78396 AL121821.2-201ENST00000556081 394 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 AC005014.3-201ENST00000605985 190 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCNA1P78396 SDR42E1P4-201ENST00000620894 481 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 AP000676.3-201ENST00000623299 569 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 AC116618.1-201ENST00000634617 774 ntBASIC2.26□□□□□ -2.05
CCNA1P78396 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CCNA1P78396 RNU6-560P-201ENST00000364007 108 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 SNORD116.1-201ENST00000365628 92 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 AL136310.1-201ENST00000404926 654 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 CIR1P3-201ENST00000405137 479 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 AIMP1P2-201ENST00000425294 312 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 RPL36AP53-201ENST00000432891 316 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 SDR42E1P3-201ENST00000438345 502 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 ELOCP30-201ENST00000447108 299 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 EXOSC3P1-201ENST00000448649 500 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.25□□□□□ -2.05
CCNA1P78396 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.25□□□□□ -2.05
CCNA1P78396 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.25□□□□□ -2.05
CCNA1P78396 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.25□□□□□ -2.05
CCNA1P78396 MIR3126-201ENST00000577443 74 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 AC060771.1-201ENST00000582031 164 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.25□□□□□ -2.05
CCNA1P78396 KC877982.1-201ENST00000602313 470 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 AL161798.1-201ENST00000604630 131 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 MIR5739-201ENST00000619803 80 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 AC009269.6-201ENST00000621778 588 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 AC099654.9-201ENST00000637055 678 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CCNA1P78396 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCNA1P78396 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
CCNA1P78396 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCNA1P78396 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CCNA1P78396 RNU6-658P-201ENST00000384606 106 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 AL354692.1-201ENST00000423044 315 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 HMGB1P27-201ENST00000431429 603 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.24□□□□□ -2.05
CCNA1P78396 USP9YP10-201ENST00000454868 628 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.24□□□□□ -2.05
CCNA1P78396 CYP2C59P-201ENST00000457790 269 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 snoU109.3-201ENST00000459477 145 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 AC005410.1-202ENST00000460347 485 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 AC010631.1-201ENST00000474150 156 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 AC055731.1-201ENST00000474387 401 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 RPL23AP63-201ENST00000498752 471 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 RNU6-703P-201ENST00000516946 107 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 RNU2-19P-201ENST00000517288 84 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 AL138963.2-201ENST00000605137 226 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 AL121917.1-203ENST00000605534 577 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 AL157392.4-201ENST00000609756 345 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.24□□□□□ -2.05
CCNA1P78396 AC008555.8-201ENST00000623602 2168 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.23□□□□□ -2.05
CCNA1P78396 Y_RNA.192-201ENST00000363977 102 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 Y_RNA.311-201ENST00000365068 96 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 RNU6-748P-201ENST00000384648 107 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 ERHP2-201ENST00000402323 299 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 AL356379.1-201ENST00000414105 126 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 MTATP6P20-201ENST00000414147 562 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.23□□□□□ -2.05
CCNA1P78396 WARS2P1-201ENST00000429678 537 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 RPS25P9-201ENST00000435591 252 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 AL591719.1-201ENST00000444669 744 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CCNA1P78396 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.23□□□□□ -2.05
CCNA1P78396 AC117503.1-201ENST00000472241 394 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 GTF2IP9-201ENST00000502460 301 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 AC021146.8-201ENST00000507455 733 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.23□□□□□ -2.05
CCNA1P78396 AC108729.3-201ENST00000513484 108 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms