Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC092001.1-201ENST00000453012 261 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.33□□□□□ -2.2
HIST1H3AP68431 AC008481.1-201ENST00000463278 396 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 AC112771.1-201ENST00000463581 102 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 AC027575.1-201ENST00000481064 460 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 AC018868.1-201ENST00000491307 315 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 AC018437.1-201ENST00000492214 406 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 AC114981.1-201ENST00000503897 678 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 MTND5P13-201ENST00000513046 1079 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 SNORA48.11-201ENST00000517015 89 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.33□□□□□ -2.2
HIST1H3AP68431 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.33□□□□□ -2.2
HIST1H3AP68431 AC092953.2-201ENST00000608000 699 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 AC243773.3-201ENST00000613270 256 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 TUG1_2.1-201ENST00000614234 87 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 AC009268.2-201ENST00000621925 457 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.33□□□□□ -2.2
HIST1H3AP68431 AC241585.2-209ENST00000638217 143 ntBASIC1.33□□□□□ -2.2
HIST1H3AP68431 AP000648.3-201ENST00000623539 4507 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HIST1H3AP68431 RNA5SP190-201ENST00000365222 118 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
HIST1H3AP68431 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.32□□□□□ -2.2
HIST1H3AP68431 AC027644.1-201ENST00000419595 298 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 RPL36AP53-201ENST00000432891 316 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 SEPT7P5-201ENST00000434048 306 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 USP9YP24-201ENST00000434374 697 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 MTND2P29-201ENST00000438595 412 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 AC117503.1-201ENST00000472241 394 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 AC011005.2-201ENST00000487324 359 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 YWHAEP4-201ENST00000505390 198 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.32□□□□□ -2.2
HIST1H3AP68431 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.32□□□□□ -2.2
HIST1H3AP68431 RNU6-390P-201ENST00000516259 103 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 AC022254.1-201ENST00000567857 235 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 AC122134.1-202ENST00000569111 1201 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 AC016925.2-201ENST00000605108 242 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 AC017037.3-201ENST00000625016 472 ntBASIC1.32□□□□□ -2.2
HIST1H3AP68431 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.32□□□□□ -2.2
HIST1H3AP68431 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.32□□□□□ -2.2
HIST1H3AP68431 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.32□□□□□ -2.2
HIST1H3AP68431 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
HIST1H3AP68431 RNU6-1167P-201ENST00000363227 94 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 RNU1-23P-201ENST00000363361 144 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
HIST1H3AP68431 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HIST1H3AP68431 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HIST1H3AP68431 UBE2V1P15-201ENST00000407776 448 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 MIR1323-201ENST00000408090 73 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.31□□□□□ -2.2
HIST1H3AP68431 UBE2FP1-201ENST00000416536 447 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 AC007098.1-201ENST00000420122 367 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 RPL7P34-201ENST00000433316 712 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 SEPT14P24-201ENST00000447236 180 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HIST1H3AP68431 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.31□□□□□ -2.2
HIST1H3AP68431 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
HIST1H3AP68431 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.31□□□□□ -2.2
HIST1H3AP68431 MRPS36P5-201ENST00000551909 298 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 AL356432.3-201ENST00000568952 465 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 AL713866.2-201ENST00000603579 219 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 AC069304.2-201ENST00000605154 435 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 AC018638.7-201ENST00000605836 1114 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 AC009237.15-201ENST00000610252 501 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 AC008121.3-201ENST00000618726 433 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 AC010975.3-201ENST00000618727 978 ntBASIC1.31□□□□□ -2.2
HIST1H3AP68431 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 AP005901.5-201ENST00000545779 1796 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 SNORA67.5-201ENST00000391036 107 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 RNU6-754P-201ENST00000391166 107 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
HIST1H3AP68431 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 KATNBL1P6-201ENST00000453433 915 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 SNORD13-201ENST00000459299 104 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 AC008628.1-201ENST00000508663 265 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 FAM206BP-201ENST00000510179 541 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 RNU6-927P-201ENST00000516199 100 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 NDUFA5P6-201ENST00000542110 379 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.3□□□□□ -2.2
HIST1H3AP68431 SNRPGP17-201ENST00000603780 214 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 AC005332.6-201ENST00000613178 446 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 AC108479.2-201ENST00000617314 601 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 AC120349.2-201ENST00000625002 298 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 AC107982.1-201ENST00000507171 1300 ntBASIC1.3□□□□□ -2.2
HIST1H3AP68431 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HIST1H3AP68431 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
HIST1H3AP68431 WWP1P1-201ENST00000466609 2769 ntBASIC1.29□□□□□ -2.2
HIST1H3AP68431 RNU5E-1-201ENST00000362477 120 ntBASIC1.29□□□□□ -2.2
HIST1H3AP68431 RNU4-13P-201ENST00000364019 141 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms