Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC090772.4-201ENST00000623599 362 ntBASIC0.83□□□□□ -2.28
UBA52P62987 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
UBA52P62987 SNORA70.7-201ENST00000384159 133 ntBASIC0.82□□□□□ -2.28
UBA52P62987 AC012497.1-201ENST00000429392 575 ntBASIC0.82□□□□□ -2.28
UBA52P62987 GDI2P2-201ENST00000445131 608 ntBASIC0.82□□□□□ -2.28
UBA52P62987 ARPC3P5-201ENST00000448802 534 ntBASIC0.82□□□□□ -2.28
UBA52P62987 AC104073.1-201ENST00000451988 151 ntBASIC0.82□□□□□ -2.28
UBA52P62987 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.82□□□□□ -2.28
UBA52P62987 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.82□□□□□ -2.28
UBA52P62987 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.82□□□□□ -2.28
UBA52P62987 EEF1B2P4-201ENST00000551398 348 ntBASIC0.82□□□□□ -2.28
UBA52P62987 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.82□□□□□ -2.28
UBA52P62987 AC005668.1-201ENST00000571142 476 ntBASIC0.82□□□□□ -2.28
UBA52P62987 VN1R107P-201ENST00000601784 209 ntBASIC0.82□□□□□ -2.28
UBA52P62987 AC138473.1-201ENST00000605717 526 ntBASIC0.82□□□□□ -2.28
UBA52P62987 SNORD114-21-201ENST00000606412 72 ntBASIC0.82□□□□□ -2.28
UBA52P62987 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.82□□□□□ -2.28
UBA52P62987 AL356585.4-201ENST00000623078 1229 ntBASIC0.82□□□□□ -2.28
UBA52P62987 AP003485.1-201ENST00000625093 753 ntBASIC0.82□□□□□ -2.28
UBA52P62987 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.82□□□□□ -2.28
UBA52P62987 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
UBA52P62987 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.81□□□□□ -2.28
UBA52P62987 ARL5AP3-201ENST00000439327 386 ntBASIC0.81□□□□□ -2.28
UBA52P62987 ATP5J2P3-201ENST00000451550 258 ntBASIC0.81□□□□□ -2.28
UBA52P62987 RNU6-775P-201ENST00000459318 96 ntBASIC0.81□□□□□ -2.28
UBA52P62987 RNU6-488P-201ENST00000515918 99 ntBASIC0.81□□□□□ -2.28
UBA52P62987 SNORA4.4-201ENST00000515921 135 ntBASIC0.81□□□□□ -2.28
UBA52P62987 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.81□□□□□ -2.28
UBA52P62987 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.81□□□□□ -2.28
UBA52P62987 AC135279.1-201ENST00000543493 504 ntBASIC0.81□□□□□ -2.28
UBA52P62987 DUXAP1-201ENST00000556632 463 ntBASIC0.81□□□□□ -2.28
UBA52P62987 MIR5000-201ENST00000577717 103 ntBASIC0.81□□□□□ -2.28
UBA52P62987 HMGB1P51-201ENST00000605166 638 ntBASIC0.81□□□□□ -2.28
UBA52P62987 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.81□□□□□ -2.28
UBA52P62987 AL121652.1-201ENST00000608851 448 ntBASIC0.81□□□□□ -2.28
UBA52P62987 DUSP12P1-201ENST00000612874 516 ntBASIC0.81□□□□□ -2.28
UBA52P62987 AC099842.1-201ENST00000619919 596 ntBASIC0.81□□□□□ -2.28
UBA52P62987 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.81□□□□□ -2.28
UBA52P62987 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.8□□□□□ -2.28
UBA52P62987 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
UBA52P62987 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
UBA52P62987 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
UBA52P62987 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.8□□□□□ -2.28
UBA52P62987 AL392003.1-201ENST00000434394 243 ntBASIC0.8□□□□□ -2.28
UBA52P62987 RAC1P7-201ENST00000445367 377 ntBASIC0.8□□□□□ -2.28
UBA52P62987 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.8□□□□□ -2.28
UBA52P62987 VPS26AP1-201ENST00000483197 979 ntBASIC0.8□□□□□ -2.28
UBA52P62987 AC025459.1-201ENST00000504072 156 ntBASIC0.8□□□□□ -2.28
UBA52P62987 AC006390.1-201ENST00000508068 283 ntBASIC0.8□□□□□ -2.28
UBA52P62987 RNU6-202P-201ENST00000515998 96 ntBASIC0.8□□□□□ -2.28
UBA52P62987 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.8□□□□□ -2.28
UBA52P62987 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.8□□□□□ -2.28
UBA52P62987 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.8□□□□□ -2.28
UBA52P62987 AL731537.2-201ENST00000561565 951 ntBASIC0.8□□□□□ -2.28
UBA52P62987 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
UBA52P62987 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
UBA52P62987 AC009233.1-201ENST00000616477 371 ntBASIC0.8□□□□□ -2.28
UBA52P62987 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.8□□□□□ -2.28
UBA52P62987 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.8□□□□□ -2.28
UBA52P62987 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
UBA52P62987 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.79□□□□□ -2.28
UBA52P62987 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
UBA52P62987 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
UBA52P62987 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
UBA52P62987 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.79□□□□□ -2.28
UBA52P62987 RPL21P90-201ENST00000415692 466 ntBASIC0.79□□□□□ -2.28
UBA52P62987 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.79□□□□□ -2.28
UBA52P62987 NDUFB4P7-201ENST00000423198 363 ntBASIC0.79□□□□□ -2.28
UBA52P62987 AC024082.2-201ENST00000434771 238 ntBASIC0.79□□□□□ -2.28
UBA52P62987 RFC5P1-201ENST00000454419 874 ntBASIC0.79□□□□□ -2.28
UBA52P62987 AC108059.3-201ENST00000456388 214 ntBASIC0.79□□□□□ -2.28
UBA52P62987 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.79□□□□□ -2.28
UBA52P62987 RNU4-18P-201ENST00000516751 149 ntBASIC0.79□□□□□ -2.28
UBA52P62987 RNU6-902P-201ENST00000517212 91 ntBASIC0.79□□□□□ -2.28
UBA52P62987 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.79□□□□□ -2.28
UBA52P62987 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.79□□□□□ -2.28
UBA52P62987 AL356432.3-201ENST00000568952 465 ntBASIC0.79□□□□□ -2.28
UBA52P62987 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.79□□□□□ -2.28
UBA52P62987 AC009974.1-201ENST00000608881 455 ntBASIC0.79□□□□□ -2.28
UBA52P62987 AL512506.2-201ENST00000624472 458 ntBASIC0.79□□□□□ -2.28
UBA52P62987 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
UBA52P62987 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.78□□□□□ -2.28
UBA52P62987 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.78□□□□□ -2.28
UBA52P62987 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
UBA52P62987 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.78□□□□□ -2.28
UBA52P62987 AL449283.1-202ENST00000418249 604 ntBASIC0.78□□□□□ -2.28
UBA52P62987 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.78□□□□□ -2.28
UBA52P62987 CR769776.1-201ENST00000441254 787 ntBASIC0.78□□□□□ -2.28
UBA52P62987 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.78□□□□□ -2.28
UBA52P62987 RPS27P1-201ENST00000450552 247 ntBASIC0.78□□□□□ -2.28
UBA52P62987 AC021382.1-201ENST00000483523 359 ntBASIC0.78□□□□□ -2.28
UBA52P62987 AC093677.1-201ENST00000514414 678 ntBASIC0.78□□□□□ -2.28
UBA52P62987 OR8K4P-201ENST00000534608 872 ntBASIC0.78□□□□□ -2.28
UBA52P62987 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
UBA52P62987 AC011712.1-201ENST00000588959 234 ntBASIC0.78□□□□□ -2.28
UBA52P62987 AC123912.5-201ENST00000605470 343 ntBASIC0.78□□□□□ -2.28
UBA52P62987 AC080013.4-201ENST00000607624 649 ntBASIC0.78□□□□□ -2.28
UBA52P62987 AC007349.4-201ENST00000608114 532 ntBASIC0.78□□□□□ -2.28
UBA52P62987 AC016252.1-201ENST00000609721 474 ntBASIC0.78□□□□□ -2.28
UBA52P62987 ZNF663P-202ENST00000641770 1131 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms