Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC136619.2-201ENST00000563361 631 ntBASIC0.77□□□□□ -2.29
RPS28P62857 MIR4782-201ENST00000577987 79 ntBASIC0.77□□□□□ -2.29
RPS28P62857 RN7SL622P-201ENST00000585292 275 ntBASIC0.77□□□□□ -2.29
RPS28P62857 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.77□□□□□ -2.29
RPS28P62857 AP000860.1-201ENST00000605250 559 ntBASIC0.77□□□□□ -2.29
RPS28P62857 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
RPS28P62857 AL356863.1-201ENST00000623378 1080 ntBASIC0.77□□□□□ -2.29
RPS28P62857 MIR7641-1-201ENST00000627518 61 ntBASIC0.77□□□□□ -2.29
RPS28P62857 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
RPS28P62857 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
RPS28P62857 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.76□□□□□ -2.29
RPS28P62857 UBE2L2-201ENST00000254302 429 ntBASIC0.76□□□□□ -2.29
RPS28P62857 MIR302D-201ENST00000362275 68 ntBASIC0.76□□□□□ -2.29
RPS28P62857 RNU6-223P-201ENST00000362830 107 ntBASIC0.76□□□□□ -2.29
RPS28P62857 Y_RNA.99-201ENST00000363138 105 ntBASIC0.76□□□□□ -2.29
RPS28P62857 RNU1-22P-201ENST00000363334 158 ntBASIC0.76□□□□□ -2.29
RPS28P62857 RNU6-359P-201ENST00000365466 108 ntBASIC0.76□□□□□ -2.29
RPS28P62857 MIR196B-201ENST00000384852 84 ntBASIC0.76□□□□□ -2.29
RPS28P62857 MIR200C-201ENST00000384980 68 ntBASIC0.76□□□□□ -2.29
RPS28P62857 MCTS2P-201ENST00000394552 546 ntBASIC0.76□□□□□ -2.29
RPS28P62857 MORN2-202ENST00000409077 465 ntTSL 5 BASIC0.76□□□□□ -2.29
RPS28P62857 RN7SKP202-201ENST00000410439 330 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC139712.2-201ENST00000424302 339 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.76□□□□□ -2.29
RPS28P62857 MTCO3P5-201ENST00000433620 714 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.76□□□□□ -2.29
RPS28P62857 MTCO3P45-201ENST00000443036 613 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AL135938.1-201ENST00000443141 297 ntBASIC0.76□□□□□ -2.29
RPS28P62857 GDI2P2-201ENST00000445131 608 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC0.76□□□□□ -2.29
RPS28P62857 AL096829.2-201ENST00000446582 742 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.76□□□□□ -2.29
RPS28P62857 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.76□□□□□ -2.29
RPS28P62857 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC0.76□□□□□ -2.29
RPS28P62857 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.76□□□□□ -2.29
RPS28P62857 YWHAEP4-201ENST00000505390 198 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC117532.1-201ENST00000514638 323 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC0.76□□□□□ -2.29
RPS28P62857 AP006587.4-201ENST00000526053 529 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.76□□□□□ -2.29
RPS28P62857 SNRPGP18-201ENST00000553000 214 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC138915.2-201ENST00000569776 97 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.76□□□□□ -2.29
RPS28P62857 SNORA77B-201ENST00000578179 125 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AP001542.2-201ENST00000593141 364 ntBASIC0.76□□□□□ -2.29
RPS28P62857 DPPA3P3-201ENST00000603842 430 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC112220.3-201ENST00000605502 502 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AL583856.2-201ENST00000606298 543 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC093788.1-201ENST00000609356 927 ntBASIC0.76□□□□□ -2.29
RPS28P62857 VN1R9P-201ENST00000614184 867 ntBASIC0.76□□□□□ -2.29
RPS28P62857 MIR6873-201ENST00000622788 63 ntBASIC0.76□□□□□ -2.29
RPS28P62857 AC099654.5-201ENST00000636479 350 ntBASIC0.76□□□□□ -2.29
RPS28P62857 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
RPS28P62857 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
RPS28P62857 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
RPS28P62857 RNU6-288P-201ENST00000363690 104 ntBASIC0.75□□□□□ -2.29
RPS28P62857 RNU6-512P-201ENST00000364438 103 ntBASIC0.75□□□□□ -2.29
RPS28P62857 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
RPS28P62857 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.75□□□□□ -2.29
RPS28P62857 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC0.75□□□□□ -2.29
RPS28P62857 AC005326.1-201ENST00000429197 123 ntBASIC0.75□□□□□ -2.29
RPS28P62857 ELOCP3-201ENST00000439303 348 ntBASIC0.75□□□□□ -2.29
RPS28P62857 PRPS1P1-201ENST00000445305 876 ntBASIC0.75□□□□□ -2.29
RPS28P62857 AP000936.2-201ENST00000447151 681 ntBASIC0.75□□□□□ -2.29
RPS28P62857 AL133547.1-201ENST00000448546 220 ntBASIC0.75□□□□□ -2.29
RPS28P62857 SSXP1-201ENST00000453640 473 ntBASIC0.75□□□□□ -2.29
RPS28P62857 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC0.75□□□□□ -2.29
RPS28P62857 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.75□□□□□ -2.29
RPS28P62857 AC114982.1-201ENST00000469402 321 ntBASIC0.75□□□□□ -2.29
RPS28P62857 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC0.75□□□□□ -2.29
RPS28P62857 AC108729.2-201ENST00000476543 840 ntBASIC0.75□□□□□ -2.29
RPS28P62857 RPS3AP14-201ENST00000483907 780 ntBASIC0.75□□□□□ -2.29
RPS28P62857 AC006499.5-201ENST00000505037 514 ntBASIC0.75□□□□□ -2.29
RPS28P62857 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC0.75□□□□□ -2.29
RPS28P62857 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.75□□□□□ -2.29
RPS28P62857 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.75□□□□□ -2.29
RPS28P62857 RNU6-965P-201ENST00000516721 96 ntBASIC0.75□□□□□ -2.29
RPS28P62857 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC0.75□□□□□ -2.29
RPS28P62857 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC0.75□□□□□ -2.29
RPS28P62857 AC067805.1-201ENST00000559344 470 ntBASIC0.75□□□□□ -2.29
RPS28P62857 MIR4666A-201ENST00000580160 79 ntBASIC0.75□□□□□ -2.29
RPS28P62857 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC0.75□□□□□ -2.29
RPS28P62857 MIR7112-201ENST00000616126 65 ntBASIC0.75□□□□□ -2.29
RPS28P62857 MIR8065-201ENST00000620577 100 ntBASIC0.75□□□□□ -2.29
RPS28P62857 YWHAEP7-203ENST00000622054 312 ntBASIC0.75□□□□□ -2.29
RPS28P62857 AC130454.1-201ENST00000622948 401 ntBASIC0.75□□□□□ -2.29
RPS28P62857 AC008993.2-201ENST00000631744 806 ntBASIC0.75□□□□□ -2.29
RPS28P62857 FTO-223ENST00000640179 210 ntTSL 5 BASIC0.75□□□□□ -2.29
RPS28P62857 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
RPS28P62857 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
RPS28P62857 ZNF876P-202ENST00000398732 1485 ntBASIC0.74□□□□□ -2.29
RPS28P62857 AC100821.1-201ENST00000523153 2479 ntBASIC0.74□□□□□ -2.29
RPS28P62857 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.74□□□□□ -2.29
RPS28P62857 RN7SKP227-201ENST00000364445 330 ntBASIC0.74□□□□□ -2.29
RPS28P62857 RNU6-898P-201ENST00000365627 104 ntBASIC0.74□□□□□ -2.29
RPS28P62857 SNORA29-201ENST00000384183 140 ntBASIC0.74□□□□□ -2.29
RPS28P62857 RNU6-114P-201ENST00000384704 105 ntBASIC0.74□□□□□ -2.29
RPS28P62857 MIR554-201ENST00000384874 96 ntBASIC0.74□□□□□ -2.29
RPS28P62857 MRPL35P1-201ENST00000404272 572 ntBASIC0.74□□□□□ -2.29
RPS28P62857 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms