Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU6-1328P-201ENST00000410938 106 ntBASIC2.54□□□□□ -2
SRP54P61011 USP9YP20-201ENST00000419224 558 ntBASIC2.54□□□□□ -2
SRP54P61011 MTND5P25-201ENST00000430499 799 ntBASIC2.54□□□□□ -2
SRP54P61011 AC011816.1-201ENST00000441346 546 ntBASIC2.54□□□□□ -2
SRP54P61011 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.54□□□□□ -2
SRP54P61011 AC233279.1-201ENST00000455300 423 ntBASIC2.54□□□□□ -2
SRP54P61011 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.54□□□□□ -2
SRP54P61011 GZMAP1-201ENST00000503054 631 ntBASIC2.54□□□□□ -2
SRP54P61011 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.54□□□□□ -2
SRP54P61011 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.54□□□□□ -2
SRP54P61011 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
SRP54P61011 RNA5SP337-201ENST00000517007 109 ntBASIC2.54□□□□□ -2
SRP54P61011 RNU6-1183P-201ENST00000517054 60 ntBASIC2.54□□□□□ -2
SRP54P61011 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SRP54P61011 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.54□□□□□ -2
SRP54P61011 AC109329.2-201ENST00000519658 482 ntBASIC2.54□□□□□ -2
SRP54P61011 RPL7P20-201ENST00000520308 745 ntBASIC2.54□□□□□ -2
SRP54P61011 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.54□□□□□ -2
SRP54P61011 AP001646.1-201ENST00000527936 915 ntBASIC2.54□□□□□ -2
SRP54P61011 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SRP54P61011 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.54□□□□□ -2
SRP54P61011 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.54□□□□□ -2
SRP54P61011 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.54□□□□□ -2
SRP54P61011 AL353778.1-201ENST00000603149 408 ntBASIC2.54□□□□□ -2
SRP54P61011 AC091152.3-201ENST00000604227 325 ntBASIC2.54□□□□□ -2
SRP54P61011 AL022161.1-201ENST00000604390 213 ntBASIC2.54□□□□□ -2
SRP54P61011 AC007938.3-201ENST00000604965 623 ntBASIC2.54□□□□□ -2
SRP54P61011 AL360219.1-201ENST00000610230 366 ntBASIC2.54□□□□□ -2
SRP54P61011 AC027807.2-201ENST00000616099 408 ntBASIC2.54□□□□□ -2
SRP54P61011 CR381653.2-201ENST00000624041 768 ntBASIC2.54□□□□□ -2
SRP54P61011 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.54□□□□□ -2
SRP54P61011 AL512643.1-201ENST00000635735 524 ntBASIC2.54□□□□□ -2
SRP54P61011 MIR7157-201ENST00000635801 60 ntBASIC2.54□□□□□ -2
SRP54P61011 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.54□□□□□ -2
SRP54P61011 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SRP54P61011 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SRP54P61011 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SRP54P61011 TEX21P-201ENST00000447107 1476 ntBASIC2.53□□□□□ -2
SRP54P61011 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.53□□□□□ -2
SRP54P61011 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SRP54P61011 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SRP54P61011 AC080128.1-201ENST00000474389 1917 ntBASIC2.53□□□□□ -2
SRP54P61011 RNU6-946P-201ENST00000383878 107 ntBASIC2.53□□□□□ -2
SRP54P61011 MIR27B-201ENST00000385129 97 ntBASIC2.53□□□□□ -2
SRP54P61011 MRPL42P2-201ENST00000403169 426 ntBASIC2.53□□□□□ -2
SRP54P61011 RNU6-920P-201ENST00000410926 92 ntBASIC2.53□□□□□ -2
SRP54P61011 RNA5SP508-201ENST00000411327 119 ntBASIC2.53□□□□□ -2
SRP54P61011 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.53□□□□□ -2
SRP54P61011 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
SRP54P61011 AC119618.1-201ENST00000434191 222 ntBASIC2.53□□□□□ -2
SRP54P61011 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.53□□□□□ -2
SRP54P61011 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
SRP54P61011 COX6CP12-201ENST00000446748 202 ntBASIC2.53□□□□□ -2
SRP54P61011 EPS15P1-201ENST00000448836 336 ntBASIC2.53□□□□□ -2
SRP54P61011 USP9YP12-201ENST00000450481 570 ntBASIC2.53□□□□□ -2
SRP54P61011 BZW1P2-201ENST00000473537 826 ntBASIC2.53□□□□□ -2
SRP54P61011 RN7SL429P-201ENST00000479090 223 ntBASIC2.53□□□□□ -2
SRP54P61011 RN7SL489P-201ENST00000486185 223 ntBASIC2.53□□□□□ -2
SRP54P61011 RPS3AP22-201ENST00000488297 769 ntBASIC2.53□□□□□ -2
SRP54P61011 RN7SL327P-201ENST00000488659 223 ntBASIC2.53□□□□□ -2
SRP54P61011 SRIP1-201ENST00000489235 288 ntBASIC2.53□□□□□ -2
SRP54P61011 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.53□□□□□ -2
SRP54P61011 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.53□□□□□ -2
SRP54P61011 MRPS33P3-201ENST00000513456 322 ntBASIC2.53□□□□□ -2
SRP54P61011 SNORA31.6-201ENST00000516241 130 ntBASIC2.53□□□□□ -2
SRP54P61011 AC009902.1-201ENST00000519351 183 ntBASIC2.53□□□□□ -2
SRP54P61011 BTF3P12-201ENST00000519620 469 ntBASIC2.53□□□□□ -2
SRP54P61011 AC022878.1-201ENST00000530684 149 ntBASIC2.53□□□□□ -2
SRP54P61011 AC243972.3-201ENST00000539655 198 ntBASIC2.53□□□□□ -2
SRP54P61011 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.53□□□□□ -2
SRP54P61011 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.53□□□□□ -2
SRP54P61011 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.53□□□□□ -2
SRP54P61011 MIR3167-201ENST00000579623 85 ntBASIC2.53□□□□□ -2
SRP54P61011 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.53□□□□□ -2
SRP54P61011 AC005261.5-201ENST00000596280 355 ntBASIC2.53□□□□□ -2
SRP54P61011 AC112191.3-201ENST00000604371 277 ntBASIC2.53□□□□□ -2
SRP54P61011 AC092354.1-201ENST00000606057 376 ntBASIC2.53□□□□□ -2
SRP54P61011 AC022893.3-201ENST00000607665 437 ntBASIC2.53□□□□□ -2
SRP54P61011 RN7SL853P-201ENST00000617250 223 ntBASIC2.53□□□□□ -2
SRP54P61011 U6.99-201ENST00000637524 83 ntBASIC2.53□□□□□ -2
SRP54P61011 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.53□□□□□ -2
SRP54P61011 AC004944.1-201ENST00000517807 3059 ntBASIC2.53□□□□□ -2.01
SRP54P61011 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.52□□□□□ -2.01
SRP54P61011 RNU4-1-201ENST00000363925 141 ntBASIC2.52□□□□□ -2.01
SRP54P61011 RNU6-553P-201ENST00000364047 96 ntBASIC2.52□□□□□ -2.01
SRP54P61011 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.52□□□□□ -2.01
SRP54P61011 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SRP54P61011 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.52□□□□□ -2.01
SRP54P61011 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.52□□□□□ -2.01
SRP54P61011 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
SRP54P61011 AC093106.2-201ENST00000428212 385 ntBASIC2.52□□□□□ -2.01
SRP54P61011 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.52□□□□□ -2.01
SRP54P61011 AC093899.1-201ENST00000457984 376 ntBASIC2.52□□□□□ -2.01
SRP54P61011 RNU7-125P-201ENST00000458760 62 ntBASIC2.52□□□□□ -2.01
SRP54P61011 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.52□□□□□ -2.01
SRP54P61011 AC007182.2-201ENST00000489251 402 ntBASIC2.52□□□□□ -2.01
SRP54P61011 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.52□□□□□ -2.01
SRP54P61011 AC010587.1-201ENST00000505809 469 ntBASIC2.52□□□□□ -2.01
SRP54P61011 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.52□□□□□ -2.01
SRP54P61011 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms