Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MTCO2P11-201ENST00000431069 680 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 AC236972.1-201ENST00000433225 199 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 BX679664.1-201ENST00000434429 253 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 AC025750.2-201ENST00000442609 450 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.66□□□□□ -1.82
RHBDL3P58872 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.66□□□□□ -1.82
RHBDL3P58872 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.66□□□□□ -1.82
RHBDL3P58872 HMGB1P29-201ENST00000505659 499 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 MTCO3P7-201ENST00000510008 774 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 AC098591.2-201ENST00000510152 315 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 MRPS36P2-201ENST00000512569 299 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.66□□□□□ -1.82
RHBDL3P58872 RNU6-405P-201ENST00000516637 110 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 SCARNA11.3-201ENST00000517276 130 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.66□□□□□ -1.82
RHBDL3P58872 AC006199.1-201ENST00000548728 219 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 AC087683.1-201ENST00000591187 441 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.66□□□□□ -1.82
RHBDL3P58872 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.66□□□□□ -1.82
RHBDL3P58872 AC126118.1-201ENST00000607744 628 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 MIR6134-201ENST00000617606 109 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 AL137790.1-201ENST00000634283 177 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.66□□□□□ -1.82
RHBDL3P58872 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RHBDL3P58872 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.66□□□□□ -1.82
RHBDL3P58872 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RHBDL3P58872 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RHBDL3P58872 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDL3P58872 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RHBDL3P58872 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.65□□□□□ -1.82
RHBDL3P58872 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.65□□□□□ -1.82
RHBDL3P58872 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RHBDL3P58872 RNU6-1287P-201ENST00000362914 107 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 SNORA62.1-201ENST00000364287 154 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 RN7SKP226-201ENST00000364912 300 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 SNORD115-7-201ENST00000365306 82 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 DYNLT3P1-201ENST00000378574 347 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 RNU6-1083P-201ENST00000384022 107 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 RNU6-1060P-201ENST00000384664 107 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 Y_RNA.576-201ENST00000384781 102 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.65□□□□□ -1.83
RHBDL3P58872 AL161651.1-201ENST00000440882 223 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 AC104058.1-201ENST00000448028 297 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.65□□□□□ -1.83
RHBDL3P58872 BTF3P15-201ENST00000455606 336 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 AL122001.1-201ENST00000457027 370 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.65□□□□□ -1.83
RHBDL3P58872 AC117440.1-201ENST00000474107 571 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.65□□□□□ -1.83
RHBDL3P58872 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.65□□□□□ -1.83
RHBDL3P58872 RNU1-143P-201ENST00000516296 146 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 OR5BN1P-201ENST00000532955 829 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.65□□□□□ -1.83
RHBDL3P58872 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.65□□□□□ -1.83
RHBDL3P58872 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
RHBDL3P58872 NDUFA8P1-201ENST00000605525 367 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 U1.23-201ENST00000610293 146 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 RNU1-68P-201ENST00000615382 146 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 AC073534.2-201ENST00000620377 381 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 U1.39-201ENST00000621562 146 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 AC005609.4-201ENST00000625071 447 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 ASNSP3-201ENST00000451989 1306 ntBASIC3.65□□□□□ -1.83
RHBDL3P58872 AC093908.1-201ENST00000623125 8092 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 AC026241.1-201ENST00000517873 2142 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RHBDL3P58872 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RHBDL3P58872 OR6C66P-201ENST00000414917 930 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.64□□□□□ -1.83
RHBDL3P58872 OR51A5P-201ENST00000415429 942 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.64□□□□□ -1.83
RHBDL3P58872 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.64□□□□□ -1.83
RHBDL3P58872 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.64□□□□□ -1.83
RHBDL3P58872 MTATP6P18-201ENST00000417994 673 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.64□□□□□ -1.83
RHBDL3P58872 AL513043.1-201ENST00000439124 535 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 RPS12P18-201ENST00000442381 270 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 NDUFB1P2-201ENST00000449477 176 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 GMFBP1-201ENST00000467831 427 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 RBBP4P6-201ENST00000508098 202 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 AP003392.2-201ENST00000527269 208 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 AL121821.2-201ENST00000556081 394 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.64□□□□□ -1.83
RHBDL3P58872 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RHBDL3P58872 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.64□□□□□ -1.83
RHBDL3P58872 AL391813.1-201ENST00000603098 260 ntBASIC3.64□□□□□ -1.83
RHBDL3P58872 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RHBDL3P58872 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.64□□□□□ -1.83
RHBDL3P58872 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.64□□□□□ -1.83
RHBDL3P58872 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.64□□□□□ -1.83
RHBDL3P58872 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RHBDL3P58872 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.63□□□□□ -1.83
RHBDL3P58872 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RHBDL3P58872 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.63□□□□□ -1.83
RHBDL3P58872 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.63□□□□□ -1.83
RHBDL3P58872 RNU6-1103P-201ENST00000384150 107 ntBASIC3.63□□□□□ -1.83
RHBDL3P58872 MIR1-2-201ENST00000384961 85 ntBASIC3.63□□□□□ -1.83
RHBDL3P58872 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RHBDL3P58872 MYL8P-204ENST00000431574 518 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms