Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH12P55289 AC012119.1-201ENST00000603184 222 ntBASIC3.13□□□□□ -1.91
CDH12P55289 ATP1B3P1-201ENST00000605365 821 ntBASIC3.13□□□□□ -1.91
CDH12P55289 MIR8058-201ENST00000615737 89 ntBASIC3.13□□□□□ -1.91
CDH12P55289 AL359314.1-201ENST00000616913 261 ntBASIC3.13□□□□□ -1.91
CDH12P55289 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH12P55289 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CDH12P55289 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH12P55289 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CDH12P55289 RNA5SP197-201ENST00000363357 119 ntBASIC3.12□□□□□ -1.91
CDH12P55289 RNU6-1303P-201ENST00000364841 107 ntBASIC3.12□□□□□ -1.91
CDH12P55289 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CDH12P55289 AL359837.1-201ENST00000381357 287 ntBASIC3.12□□□□□ -1.91
CDH12P55289 SNORA75B-201ENST00000384053 137 ntBASIC3.12□□□□□ -1.91
CDH12P55289 RNU6-45P-201ENST00000384471 107 ntBASIC3.12□□□□□ -1.91
CDH12P55289 Y_RNA.530-201ENST00000384587 101 ntBASIC3.12□□□□□ -1.91
CDH12P55289 RPS4XP7-201ENST00000406274 780 ntBASIC3.12□□□□□ -1.91
CDH12P55289 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH12P55289 RN7SKP32-201ENST00000410167 303 ntBASIC3.12□□□□□ -1.91
CDH12P55289 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
CDH12P55289 RPL21P90-201ENST00000415692 466 ntBASIC3.12□□□□□ -1.91
CDH12P55289 USP9YP20-201ENST00000419224 558 ntBASIC3.12□□□□□ -1.91
CDH12P55289 GPM6BP2-201ENST00000432046 144 ntBASIC3.12□□□□□ -1.91
CDH12P55289 AC092573.2-201ENST00000434546 243 ntBASIC3.12□□□□□ -1.91
CDH12P55289 HMGB1P12-201ENST00000438594 598 ntBASIC3.12□□□□□ -1.91
CDH12P55289 MTND4LP16-201ENST00000440828 295 ntBASIC3.12□□□□□ -1.91
CDH12P55289 GPM6BP1-201ENST00000446387 144 ntBASIC3.12□□□□□ -1.91
CDH12P55289 MRPL50P4-201ENST00000446432 475 ntBASIC3.12□□□□□ -1.91
CDH12P55289 AC092001.1-201ENST00000453012 261 ntBASIC3.12□□□□□ -1.91
CDH12P55289 CECR9-201ENST00000453421 199 ntBASIC3.12□□□□□ -1.91
CDH12P55289 RNU7-167P-201ENST00000459160 62 ntBASIC3.12□□□□□ -1.91
CDH12P55289 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH12P55289 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH12P55289 RPS15AP34-201ENST00000487776 387 ntBASIC3.12□□□□□ -1.91
CDH12P55289 AC022493.1-201ENST00000492984 337 ntBASIC3.12□□□□□ -1.91
CDH12P55289 TBCAP3-201ENST00000512475 312 ntBASIC3.12□□□□□ -1.91
CDH12P55289 RN7SKP13-201ENST00000515933 244 ntBASIC3.12□□□□□ -1.91
CDH12P55289 RN7SKP256-201ENST00000517201 314 ntBASIC3.12□□□□□ -1.91
CDH12P55289 AC090136.1-201ENST00000520009 240 ntBASIC3.12□□□□□ -1.91
CDH12P55289 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH12P55289 AP003122.3-201ENST00000526316 255 ntBASIC3.12□□□□□ -1.91
CDH12P55289 AC084851.1-201ENST00000529105 249 ntBASIC3.12□□□□□ -1.91
CDH12P55289 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH12P55289 AC026464.5-201ENST00000562497 722 ntBASIC3.12□□□□□ -1.91
CDH12P55289 RPS3AP23-202ENST00000574601 686 ntBASIC3.12□□□□□ -1.91
CDH12P55289 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH12P55289 AC136601.2-201ENST00000604356 474 ntBASIC3.12□□□□□ -1.91
CDH12P55289 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH12P55289 MIR7851-201ENST00000610611 160 ntBASIC3.12□□□□□ -1.91
CDH12P55289 AC022418.1-201ENST00000624118 445 ntBASIC3.12□□□□□ -1.91
CDH12P55289 AC048347.1-201ENST00000624621 427 ntBASIC3.12□□□□□ -1.91
CDH12P55289 AC112487.2-201ENST00000637950 304 ntBASIC3.12□□□□□ -1.91
CDH12P55289 AL672296.1-201ENST00000427780 2158 ntBASIC3.12□□□□□ -1.91
CDH12P55289 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CDH12P55289 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CDH12P55289 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH12P55289 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CDH12P55289 RNA5SP124-201ENST00000362739 110 ntBASIC3.11□□□□□ -1.91
CDH12P55289 Y_RNA.184-201ENST00000363884 108 ntBASIC3.11□□□□□ -1.91
CDH12P55289 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH12P55289 Y_RNA.414-201ENST00000384011 101 ntBASIC3.11□□□□□ -1.91
CDH12P55289 SNORA5A-201ENST00000384111 134 ntBASIC3.11□□□□□ -1.91
CDH12P55289 Y_RNA.529-201ENST00000384586 119 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AL122016.1-201ENST00000403365 367 ntBASIC3.11□□□□□ -1.91
CDH12P55289 HSPE1P1-201ENST00000421494 318 ntBASIC3.11□□□□□ -1.91
CDH12P55289 Z82210.1-201ENST00000440037 231 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC093019.1-201ENST00000443135 252 ntBASIC3.11□□□□□ -1.91
CDH12P55289 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH12P55289 RPL21P104-201ENST00000464143 478 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC087884.1-201ENST00000469738 328 ntBASIC3.11□□□□□ -1.91
CDH12P55289 RPL30P5-201ENST00000494923 336 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH12P55289 AC103851.1-201ENST00000506833 274 ntBASIC3.11□□□□□ -1.91
CDH12P55289 HIGD1AP13-201ENST00000509878 289 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.11□□□□□ -1.91
CDH12P55289 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH12P55289 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.11□□□□□ -1.91
CDH12P55289 RNU6-143P-201ENST00000516942 93 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC022690.1-201ENST00000526681 550 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH12P55289 SYF2P1-201ENST00000550658 413 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH12P55289 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CDH12P55289 AL157871.3-201ENST00000557231 293 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC106785.1-201ENST00000565935 262 ntBASIC3.11□□□□□ -1.91
CDH12P55289 MIR1273C-201ENST00000578669 77 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.11□□□□□ -1.91
CDH12P55289 MIR548AC-201ENST00000585049 88 ntBASIC3.11□□□□□ -1.91
CDH12P55289 MIR3942-201ENST00000585264 109 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC006557.5-201ENST00000603126 811 ntBASIC3.11□□□□□ -1.91
CDH12P55289 U2.17-201ENST00000611454 95 ntBASIC3.11□□□□□ -1.91
CDH12P55289 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH12P55289 SNORD39.4-201ENST00000620099 78 ntBASIC3.11□□□□□ -1.91
CDH12P55289 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.11□□□□□ -1.91
CDH12P55289 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH12P55289 AL133216.2-202ENST00000634512 349 ntBASIC3.11□□□□□ -1.91
CDH12P55289 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CDH12P55289 ZNF826P-207ENST00000622273 1910 ntBASIC3.11□□□□□ -1.91
CDH12P55289 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH12P55289 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms