Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-123P-201ENST00000516163 102 ntBASIC2.85□□□□□ -1.95
CDH11P55287 RNU6-718P-201ENST00000516166 105 ntBASIC2.85□□□□□ -1.95
CDH11P55287 RNU6-914P-201ENST00000516749 109 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH11P55287 AC022690.1-201ENST00000526681 550 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH11P55287 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH11P55287 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH11P55287 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH11P55287 AMZ2P1-203ENST00000565833 850 ntBASIC2.85□□□□□ -1.95
CDH11P55287 HSPE1P7-201ENST00000604681 321 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH11P55287 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CDH11P55287 CUL1P1-201ENST00000509510 2425 ntBASIC2.85□□□□□ -1.95
CDH11P55287 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AL353743.1-202ENST00000431724 1695 ntBASIC2.85□□□□□ -1.95
CDH11P55287 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDH11P55287 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDH11P55287 RNA5SP374-201ENST00000362939 125 ntBASIC2.84□□□□□ -1.95
CDH11P55287 RNU6-270P-201ENST00000364131 105 ntBASIC2.84□□□□□ -1.95
CDH11P55287 RNU6-512P-201ENST00000364438 103 ntBASIC2.84□□□□□ -1.95
CDH11P55287 Y_RNA.255-201ENST00000364581 97 ntBASIC2.84□□□□□ -1.95
CDH11P55287 SNORA51.4-201ENST00000364993 124 ntBASIC2.84□□□□□ -1.95
CDH11P55287 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDH11P55287 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH11P55287 RNU6-190P-201ENST00000384154 102 ntBASIC2.84□□□□□ -1.95
CDH11P55287 RNU6-217P-201ENST00000384164 104 ntBASIC2.84□□□□□ -1.95
CDH11P55287 MIR128-1-201ENST00000384921 82 ntBASIC2.84□□□□□ -1.95
CDH11P55287 RNU6-903P-201ENST00000391270 109 ntBASIC2.84□□□□□ -1.95
CDH11P55287 NDUFB4P4-201ENST00000404822 243 ntBASIC2.84□□□□□ -1.95
CDH11P55287 RPL5P18-201ENST00000406671 891 ntBASIC2.84□□□□□ -1.95
CDH11P55287 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDH11P55287 RN7SKP58-201ENST00000411010 305 ntBASIC2.84□□□□□ -1.95
CDH11P55287 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.84□□□□□ -1.95
CDH11P55287 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
CDH11P55287 MTCYBP8-201ENST00000422855 651 ntBASIC2.84□□□□□ -1.95
CDH11P55287 MTCO1P20-201ENST00000425366 358 ntBASIC2.84□□□□□ -1.95
CDH11P55287 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH11P55287 AC093151.1-201ENST00000427711 313 ntBASIC2.84□□□□□ -1.95
CDH11P55287 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.84□□□□□ -1.95
CDH11P55287 AC007919.1-201ENST00000429380 217 ntBASIC2.84□□□□□ -1.95
CDH11P55287 HMGB1P27-201ENST00000431429 603 ntBASIC2.84□□□□□ -1.95
CDH11P55287 AL591704.1-201ENST00000432574 275 ntBASIC2.84□□□□□ -1.95
CDH11P55287 AL591212.2-201ENST00000433923 257 ntBASIC2.84□□□□□ -1.95
CDH11P55287 AL596276.1-201ENST00000434465 418 ntBASIC2.84□□□□□ -1.95
CDH11P55287 MTATP6P13-201ENST00000438531 667 ntBASIC2.84□□□□□ -1.95
CDH11P55287 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH11P55287 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH11P55287 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH11P55287 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH11P55287 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH11P55287 AL163973.1-201ENST00000484753 577 ntBASIC2.84□□□□□ -1.95
CDH11P55287 AC109927.2-201ENST00000506416 303 ntBASIC2.84□□□□□ -1.95
CDH11P55287 MTCO3P9-201ENST00000506989 781 ntBASIC2.84□□□□□ -1.95
CDH11P55287 AC104806.1-201ENST00000508720 308 ntBASIC2.84□□□□□ -1.95
CDH11P55287 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH11P55287 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.84□□□□□ -1.95
CDH11P55287 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH11P55287 AC007536.1-201ENST00000533382 349 ntBASIC2.84□□□□□ -1.95
CDH11P55287 MIR15A-201ENST00000607334 83 ntBASIC2.84□□□□□ -1.95
CDH11P55287 AL359547.2-201ENST00000615810 418 ntBASIC2.84□□□□□ -1.95
CDH11P55287 AL354950.2-201ENST00000617939 290 ntBASIC2.84□□□□□ -1.95
CDH11P55287 uc_338.11-201ENST00000619132 160 ntBASIC2.84□□□□□ -1.95
CDH11P55287 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH11P55287 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH11P55287 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.84□□□□□ -1.96
CDH11P55287 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDH11P55287 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH11P55287 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH11P55287 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
CDH11P55287 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDH11P55287 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
CDH11P55287 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH11P55287 Y_RNA.38-201ENST00000362617 102 ntBASIC2.83□□□□□ -1.96
CDH11P55287 RNU6-552P-201ENST00000362869 119 ntBASIC2.83□□□□□ -1.96
CDH11P55287 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.83□□□□□ -1.96
CDH11P55287 SNORA4.3-201ENST00000365564 137 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH11P55287 RNU6-550P-201ENST00000391057 101 ntBASIC2.83□□□□□ -1.96
CDH11P55287 BTF3P7-201ENST00000407097 488 ntBASIC2.83□□□□□ -1.96
CDH11P55287 RNU2-29P-201ENST00000410423 189 ntBASIC2.83□□□□□ -1.96
CDH11P55287 EEF1A1P40-201ENST00000412883 573 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDH11P55287 BTF3L4P3-201ENST00000418879 476 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH11P55287 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH11P55287 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH11P55287 Z75741.1-201ENST00000446793 314 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH11P55287 AC109925.1-201ENST00000478069 331 ntBASIC2.83□□□□□ -1.96
CDH11P55287 MTAPP1-201ENST00000489154 819 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH11P55287 FAM92A1P2-202ENST00000504766 877 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AL117351.2-201ENST00000513571 157 ntBASIC2.83□□□□□ -1.96
CDH11P55287 RN7SKP43-201ENST00000516173 320 ntBASIC2.83□□□□□ -1.96
CDH11P55287 RNU6-1281P-201ENST00000516223 105 ntBASIC2.83□□□□□ -1.96
CDH11P55287 RNA5SP503-201ENST00000517047 117 ntBASIC2.83□□□□□ -1.96
CDH11P55287 AC109635.3-201ENST00000529536 185 ntBASIC2.83□□□□□ -1.96
CDH11P55287 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.83□□□□□ -1.96
CDH11P55287 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms