Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 Y_RNA.176-201ENST00000363815 109 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 Y_RNA.367-201ENST00000365544 101 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 RNU6-606P-201ENST00000384721 111 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 MIR135A2-201ENST00000384854 100 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 RNY4P36-201ENST00000391116 96 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN1P54253 AL445529.1-201ENST00000398713 389 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
ATXN1P54253 RNA5SP107-201ENST00000411358 122 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN1P54253 MED13P1-201ENST00000428342 171 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 ATP5JP1-201ENST00000431631 322 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.95□□□□□ -1.78
ATXN1P54253 IFNA20P-201ENST00000436840 528 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.95□□□□□ -1.78
ATXN1P54253 AL356010.1-201ENST00000456364 102 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AC006512.1-201ENST00000468816 291 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.95□□□□□ -1.78
ATXN1P54253 AC233702.1-201ENST00000482905 502 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.95□□□□□ -1.78
ATXN1P54253 RPL7P23-201ENST00000493874 747 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN1P54253 PCBP2P3-201ENST00000509726 843 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 MTND1P19-201ENST00000511780 315 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AC067942.3-201ENST00000512025 362 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 RNU6-635P-201ENST00000516651 102 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 RNU6-64P-201ENST00000517119 105 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AC009812.2-201ENST00000517657 457 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.95□□□□□ -1.78
ATXN1P54253 DEFB108D-201ENST00000527787 222 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AP002404.1-201ENST00000532005 451 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.95□□□□□ -1.78
ATXN1P54253 AL137843.1-201ENST00000605078 385 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AC012443.1-201ENST00000605605 231 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 BRDTP1-201ENST00000605735 677 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AL121992.2-201ENST00000606262 256 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 SNORA62.6-201ENST00000606322 83 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 AC062037.2-201ENST00000610137 73 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.95□□□□□ -1.78
ATXN1P54253 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.95□□□□□ -1.78
ATXN1P54253 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN1P54253 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.95□□□□□ -1.78
ATXN1P54253 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN1P54253 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN1P54253 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.95□□□□□ -1.78
ATXN1P54253 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ATXN1P54253 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN1P54253 CDC27P3-201ENST00000635418 1910 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 Y_RNA.117-201ENST00000363294 101 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 Y_RNA.157-201ENST00000363638 102 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 RNU4-48P-201ENST00000365559 182 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 Y_RNA.396-201ENST00000383949 103 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 RNU6-641P-201ENST00000384006 107 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 Y_RNA.510-201ENST00000384511 114 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 RNU6-754P-201ENST00000391166 107 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN1P54253 RNU2-43P-201ENST00000410306 190 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 SSXP9-201ENST00000417503 292 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.94□□□□□ -1.78
ATXN1P54253 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN1P54253 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN1P54253 AL356535.1-201ENST00000440335 398 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 AC005094.1-201ENST00000440420 368 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN1P54253 AC016696.1-201ENST00000446949 318 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.94□□□□□ -1.78
ATXN1P54253 RNU7-152P-201ENST00000458982 64 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 RPS23P3-201ENST00000470993 430 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.94□□□□□ -1.78
ATXN1P54253 SNORD27.1-201ENST00000516319 72 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 RN7SKP295-201ENST00000517264 153 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 RNU6-988P-201ENST00000519081 107 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 FAM60DP-201ENST00000524174 632 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.94□□□□□ -1.78
ATXN1P54253 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN1P54253 RRN3P3-201ENST00000549207 578 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.94□□□□□ -1.78
ATXN1P54253 MIR3133-201ENST00000583157 78 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.94□□□□□ -1.78
ATXN1P54253 AL137849.1-201ENST00000604767 169 ntBASIC3.94□□□□□ -1.78
ATXN1P54253 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.94□□□□□ -1.78
ATXN1P54253 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.94□□□□□ -1.78
ATXN1P54253 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ATXN1P54253 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN1P54253 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN1P54253 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN1P54253 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN1P54253 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN1P54253 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN1P54253 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN1P54253 AC006020.1-201ENST00000420179 1854 ntBASIC3.93□□□□□ -1.78
ATXN1P54253 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN1P54253 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN1P54253 RNA5SP295-201ENST00000362655 121 ntBASIC3.93□□□□□ -1.78
ATXN1P54253 Y_RNA.81-201ENST00000362997 102 ntBASIC3.93□□□□□ -1.78
ATXN1P54253 Y_RNA.255-201ENST00000364581 97 ntBASIC3.93□□□□□ -1.78
ATXN1P54253 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN1P54253 AL136372.1-201ENST00000403060 228 ntBASIC3.93□□□□□ -1.78
ATXN1P54253 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.93□□□□□ -1.78
ATXN1P54253 MTCO2P27-201ENST00000420740 428 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms