Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC087588.2-201ENST00000617667 426 ntBASIC0.42□□□□□ -2.34
CLTCL1P53675 RNA5SP25-201ENST00000410815 110 ntBASIC0.41□□□□□ -2.34
CLTCL1P53675 RPL7P29-201ENST00000437151 728 ntBASIC0.41□□□□□ -2.34
CLTCL1P53675 TRBVB-201ENST00000477100 408 ntBASIC0.41□□□□□ -2.34
CLTCL1P53675 RNA5SP404-201ENST00000517118 132 ntBASIC0.41□□□□□ -2.34
CLTCL1P53675 AC136932.1-201ENST00000574771 208 ntBASIC0.41□□□□□ -2.34
CLTCL1P53675 AP000254.1-201ENST00000609934 520 ntBASIC0.41□□□□□ -2.34
CLTCL1P53675 MIR7515-201ENST00000637837 67 ntBASIC0.41□□□□□ -2.34
CLTCL1P53675 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
CLTCL1P53675 Y_RNA.60-201ENST00000362831 98 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 RNU6-105P-201ENST00000363909 104 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 MIR32-201ENST00000384965 70 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 RNA5SP105-201ENST00000391123 113 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.4□□□□□ -2.35
CLTCL1P53675 AC010099.3-201ENST00000423896 409 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.4□□□□□ -2.35
CLTCL1P53675 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.4□□□□□ -2.35
CLTCL1P53675 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.4□□□□□ -2.35
CLTCL1P53675 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.4□□□□□ -2.35
CLTCL1P53675 AL590705.4-201ENST00000532209 134 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.4□□□□□ -2.35
CLTCL1P53675 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.4□□□□□ -2.35
CLTCL1P53675 FAM106CP-201ENST00000582212 507 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 AC123912.3-201ENST00000600907 1367 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 AC106900.2-201ENST00000604994 317 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 AC013470.4-201ENST00000619978 986 ntBASIC0.4□□□□□ -2.35
CLTCL1P53675 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CLTCL1P53675 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.39□□□□□ -2.35
CLTCL1P53675 ELOCP11-201ENST00000436690 332 ntBASIC0.39□□□□□ -2.35
CLTCL1P53675 ELOCP16-201ENST00000444494 332 ntBASIC0.39□□□□□ -2.35
CLTCL1P53675 ACA64.5-201ENST00000516207 127 ntBASIC0.39□□□□□ -2.35
CLTCL1P53675 AP004371.1-201ENST00000525240 214 ntBASIC0.39□□□□□ -2.35
CLTCL1P53675 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.39□□□□□ -2.35
CLTCL1P53675 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.39□□□□□ -2.35
CLTCL1P53675 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.39□□□□□ -2.35
CLTCL1P53675 AL512506.2-201ENST00000624472 458 ntBASIC0.39□□□□□ -2.35
CLTCL1P53675 AC092192.1-201ENST00000633154 1018 ntBASIC0.39□□□□□ -2.35
CLTCL1P53675 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.39□□□□□ -2.35
CLTCL1P53675 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CLTCL1P53675 AC138393.1-203ENST00000327086 343 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 RNU1-36P-201ENST00000365130 165 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 AC013410.2-201ENST00000422627 201 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.38□□□□□ -2.35
CLTCL1P53675 RSU1P2-202ENST00000437884 485 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 RPS15AP27-201ENST00000449183 343 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 Z82190.1-201ENST00000454534 490 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.38□□□□□ -2.35
CLTCL1P53675 AL627230.5-201ENST00000619807 58 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 AC006963.1-201ENST00000624003 1052 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CLTCL1P53675 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
CLTCL1P53675 RNU1-105P-201ENST00000363470 161 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CLTCL1P53675 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CLTCL1P53675 HMGB3P31-201ENST00000413333 595 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.38□□□□□ -2.35
CLTCL1P53675 AC019288.1-201ENST00000557918 224 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 BNIP3P25-201ENST00000596023 559 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.38□□□□□ -2.35
CLTCL1P53675 AL590410.1-201ENST00000617925 333 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.38□□□□□ -2.35
CLTCL1P53675 MIR338-201ENST00000636369 67 ntBASIC0.38□□□□□ -2.35
CLTCL1P53675 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CLTCL1P53675 SNORA2A-201ENST00000383885 135 ntBASIC0.37□□□□□ -2.35
CLTCL1P53675 RNU6-338P-201ENST00000383888 105 ntBASIC0.37□□□□□ -2.35
CLTCL1P53675 RNU6-220P-201ENST00000390919 107 ntBASIC0.37□□□□□ -2.35
CLTCL1P53675 MIR1265-201ENST00000408444 86 ntBASIC0.37□□□□□ -2.35
CLTCL1P53675 HMGB1P36-201ENST00000487709 576 ntBASIC0.37□□□□□ -2.35
CLTCL1P53675 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.37□□□□□ -2.35
CLTCL1P53675 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.37□□□□□ -2.35
CLTCL1P53675 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.37□□□□□ -2.35
CLTCL1P53675 MRPS36P2-201ENST00000512569 299 ntBASIC0.37□□□□□ -2.35
CLTCL1P53675 AC095031.1-201ENST00000623685 672 ntBASIC0.37□□□□□ -2.35
CLTCL1P53675 MTCO1P23-201ENST00000415223 1526 ntBASIC0.37□□□□□ -2.35
CLTCL1P53675 MTCYBP34-201ENST00000439552 670 ntBASIC0.36□□□□□ -2.35
CLTCL1P53675 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.36□□□□□ -2.35
CLTCL1P53675 RN7SKP277-201ENST00000516895 283 ntBASIC0.36□□□□□ -2.35
CLTCL1P53675 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.36□□□□□ -2.35
CLTCL1P53675 AC074051.3-201ENST00000570238 358 ntBASIC0.36□□□□□ -2.35
CLTCL1P53675 MTND4LP24-201ENST00000572277 291 ntBASIC0.36□□□□□ -2.35
CLTCL1P53675 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.36□□□□□ -2.35
CLTCL1P53675 AC018638.7-201ENST00000605836 1114 ntBASIC0.36□□□□□ -2.35
CLTCL1P53675 AC134026.1-201ENST00000623249 2239 ntBASIC0.36□□□□□ -2.35
CLTCL1P53675 MIR518A2-201ENST00000384966 87 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.35□□□□□ -2.35
CLTCL1P53675 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.35□□□□□ -2.35
CLTCL1P53675 AL606489.2-201ENST00000433886 234 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.35□□□□□ -2.35
CLTCL1P53675 OR8K4P-201ENST00000534608 872 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 AC022254.1-201ENST00000567857 235 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 MTCO2P22-201ENST00000603246 681 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 RNU6-173P-201ENST00000364215 104 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 Y_RNA.476-201ENST00000384347 108 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 EDDM3CP-201ENST00000415977 425 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 Z99497.1-201ENST00000421282 135 ntBASIC0.35□□□□□ -2.35
CLTCL1P53675 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms