Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNA5SP383-201ENST00000362934 120 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 U3.6-201ENST00000363622 211 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 RNU5E-4P-201ENST00000364931 120 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 MIR1289-1-201ENST00000408836 144 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 RNA5SP274-201ENST00000410484 108 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCN3P51790 RPL30P16-201ENST00000419341 429 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AL109913.1-201ENST00000421173 514 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCN3P51790 MTCO1P20-201ENST00000425366 358 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.22□□□□□ -1.89
CLCN3P51790 ELOCP14-201ENST00000428070 331 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCN3P51790 RPL23AP22-201ENST00000437556 453 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 ELOCP7-201ENST00000439968 331 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 PIGFP3-201ENST00000441918 722 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.22□□□□□ -1.89
CLCN3P51790 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCN3P51790 RPL37P6-201ENST00000460682 294 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC126389.1-201ENST00000477436 290 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 RPL36AP51-201ENST00000487216 318 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.22□□□□□ -1.89
CLCN3P51790 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCN3P51790 RN7SKP132-201ENST00000516001 208 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 RNU6-358P-201ENST00000516564 75 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 Y_RNA.704-201ENST00000516851 102 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 RNU6-835P-201ENST00000516974 104 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC093331.1-201ENST00000521474 169 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLCN3P51790 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.22□□□□□ -1.89
CLCN3P51790 AL512360.1-201ENST00000555346 234 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 HMGB1P6-201ENST00000569046 646 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC098848.2-201ENST00000588023 330 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC025449.1-201ENST00000603896 529 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC007621.1-201ENST00000604544 437 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC008962.1-201ENST00000605729 304 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC007619.2-201ENST00000605743 379 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC093788.1-201ENST00000609356 927 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCN3P51790 AP003122.6-201ENST00000623831 495 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCN3P51790 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLCN3P51790 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CLCN3P51790 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CLCN3P51790 MTND5P17-201ENST00000418405 1603 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 AC007256.1-201ENST00000392253 2765 ntBASIC3.22□□□□□ -1.89
CLCN3P51790 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.21□□□□□ -1.89
CLCN3P51790 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.21□□□□□ -1.89
CLCN3P51790 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCN3P51790 SNORA9.2-201ENST00000365361 133 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCN3P51790 RNU6-946P-201ENST00000383878 107 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 Y_RNA.481-201ENST00000384373 102 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLCN3P51790 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCN3P51790 AL592148.1-201ENST00000413568 445 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 AC138393.2-201ENST00000414742 246 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCN3P51790 AL512844.2-201ENST00000433990 593 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 AC092573.2-201ENST00000434546 243 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 DPPA3P1-201ENST00000448050 469 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 AC083798.1-201ENST00000472671 131 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 UBE2DNL-203ENST00000474922 222 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 AL135752.1-201ENST00000479477 471 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 RPL30P14-201ENST00000482744 348 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 RNA5SP356-201ENST00000515972 94 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 SNORD27.1-201ENST00000516319 72 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 SNORA40.12-201ENST00000516329 111 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 RNA5SP367-201ENST00000516557 118 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 SNORA20.3-201ENST00000516880 132 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCN3P51790 AMZ2P1-203ENST00000565833 850 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 AC012507.3-201ENST00000603556 477 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 DPPA3P3-201ENST00000603842 430 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 AL035413.2-201ENST00000604801 525 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLCN3P51790 AL589994.2-201ENST00000621124 579 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 U6.98-201ENST00000637157 84 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 MTND5P42-201ENST00000637720 498 ntBASIC3.21□□□□□ -1.9
CLCN3P51790 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCN3P51790 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCN3P51790 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCN3P51790 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCN3P51790 RNU6-1120P-201ENST00000362988 108 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 RNU6-1167P-201ENST00000363227 94 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 RNU6-188P-201ENST00000364207 107 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 RNU6-1322P-201ENST00000364309 107 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLCN3P51790 RNU6-1158P-201ENST00000391167 107 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 AC068050.1-201ENST00000394891 380 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 AL139397.2-201ENST00000404529 772 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 RNU6-1077P-201ENST00000410506 102 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 AC245054.2-201ENST00000415639 319 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 AC007390.1-201ENST00000415722 356 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 USP9YP27-201ENST00000418455 438 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCN3P51790 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.2□□□□□ -1.9
CLCN3P51790 AC236972.1-201ENST00000433225 199 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCN3P51790 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms