Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RNU6-1083P-201ENST00000384022 107 ntBASIC2.98□□□□□ -1.93
CLK1P49759 RN7SKP27-201ENST00000410684 333 ntBASIC2.98□□□□□ -1.93
CLK1P49759 RNU2-8P-201ENST00000410727 190 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AC007283.2-201ENST00000424739 197 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AC097713.2-201ENST00000430199 356 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.98□□□□□ -1.93
CLK1P49759 RPL39P40-201ENST00000445481 146 ntBASIC2.98□□□□□ -1.93
CLK1P49759 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.98□□□□□ -1.93
CLK1P49759 RNU7-26P-201ENST00000458980 63 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.98□□□□□ -1.93
CLK1P49759 RPL21P10-201ENST00000463521 490 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AC007182.2-201ENST00000489251 402 ntBASIC2.98□□□□□ -1.93
CLK1P49759 RNU5F-8P-201ENST00000515941 111 ntBASIC2.98□□□□□ -1.93
CLK1P49759 RNU1-104P-201ENST00000517280 175 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AC022616.3-201ENST00000523940 148 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AP003072.2-201ENST00000527756 676 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AC109635.3-201ENST00000529536 185 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.98□□□□□ -1.93
CLK1P49759 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLK1P49759 AP003034.1-201ENST00000534621 422 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.98□□□□□ -1.93
CLK1P49759 NACAP3-201ENST00000552100 481 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AL121579.1-201ENST00000555129 305 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AC136601.2-201ENST00000604356 474 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AC007363.1-201ENST00000604736 620 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AP001330.5-201ENST00000607176 411 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AC008536.2-201ENST00000607284 349 ntBASIC2.98□□□□□ -1.93
CLK1P49759 AL357078.3-201ENST00000607528 618 ntBASIC2.98□□□□□ -1.93
CLK1P49759 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLK1P49759 MIR1321-201ENST00000637766 79 ntBASIC2.98□□□□□ -1.93
CLK1P49759 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.98□□□□□ -1.93
CLK1P49759 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLK1P49759 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLK1P49759 MTCO1P12-201ENST00000414273 1543 ntBASIC2.98□□□□□ -1.93
CLK1P49759 MAPK10-266ENST00000641066 6555 ntBASIC2.97□□□□□ -1.93
CLK1P49759 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLK1P49759 AL359693.1-201ENST00000614959 2407 ntBASIC2.97□□□□□ -1.93
CLK1P49759 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLK1P49759 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.97□□□□□ -1.93
CLK1P49759 Y_RNA.89-201ENST00000363031 102 ntBASIC2.97□□□□□ -1.93
CLK1P49759 RNA5SP197-201ENST00000363357 119 ntBASIC2.97□□□□□ -1.93
CLK1P49759 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.97□□□□□ -1.93
CLK1P49759 RNA5SP72-201ENST00000364442 117 ntBASIC2.97□□□□□ -1.93
CLK1P49759 RNU6-169P-201ENST00000365336 107 ntBASIC2.97□□□□□ -1.93
CLK1P49759 RNU1-39P-201ENST00000383897 165 ntBASIC2.97□□□□□ -1.93
CLK1P49759 U3.19-201ENST00000390893 196 ntBASIC2.97□□□□□ -1.93
CLK1P49759 RNU6-750P-201ENST00000390946 107 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AC110754.1-201ENST00000399740 601 ntBASIC2.97□□□□□ -1.93
CLK1P49759 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.97□□□□□ -1.93
CLK1P49759 MRPL42P2-201ENST00000403169 426 ntBASIC2.97□□□□□ -1.93
CLK1P49759 RAP1BP3-201ENST00000407180 549 ntBASIC2.97□□□□□ -1.93
CLK1P49759 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.97□□□□□ -1.93
CLK1P49759 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLK1P49759 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.97□□□□□ -1.93
CLK1P49759 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CLK1P49759 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.97□□□□□ -1.93
CLK1P49759 MTCO1P20-201ENST00000425366 358 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.97□□□□□ -1.93
CLK1P49759 HMGB1P9-201ENST00000429856 646 ntBASIC2.97□□□□□ -1.93
CLK1P49759 FCF1P1-201ENST00000432690 571 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.97□□□□□ -1.93
CLK1P49759 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.97□□□□□ -1.93
CLK1P49759 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.97□□□□□ -1.93
CLK1P49759 ELOCP23-201ENST00000452014 332 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.97□□□□□ -1.93
CLK1P49759 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.97□□□□□ -1.93
CLK1P49759 AC010493.1-201ENST00000513479 292 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.97□□□□□ -1.93
CLK1P49759 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.97□□□□□ -1.93
CLK1P49759 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.97□□□□□ -1.93
CLK1P49759 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.97□□□□□ -1.93
CLK1P49759 AL512310.1-201ENST00000548639 172 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AL512360.1-201ENST00000555346 234 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AC023824.2-201ENST00000566185 400 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AC025678.1-201ENST00000567861 338 ntBASIC2.97□□□□□ -1.93
CLK1P49759 MIR3146-201ENST00000580367 79 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AC060771.1-201ENST00000582031 164 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AF038458.1-201ENST00000588406 262 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AC121334.2-201ENST00000605387 271 ntBASIC2.97□□□□□ -1.93
CLK1P49759 SNHG22-203ENST00000617833 660 ntBASIC2.97□□□□□ -1.93
CLK1P49759 MIR7975-201ENST00000619350 68 ntBASIC2.97□□□□□ -1.93
CLK1P49759 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.97□□□□□ -1.93
CLK1P49759 AC139792.3-201ENST00000623525 224 ntBASIC2.97□□□□□ -1.93
CLK1P49759 U6.105-201ENST00000637379 88 ntBASIC2.97□□□□□ -1.93
CLK1P49759 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CLK1P49759 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.93
CLK1P49759 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLK1P49759 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CLK1P49759 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLK1P49759 RNU6-1085P-201ENST00000363576 107 ntBASIC2.96□□□□□ -1.94
CLK1P49759 RNU6-483P-201ENST00000384088 108 ntBASIC2.96□□□□□ -1.94
CLK1P49759 MIR490-201ENST00000384865 128 ntBASIC2.96□□□□□ -1.94
CLK1P49759 MIR19A-201ENST00000384878 82 ntBASIC2.96□□□□□ -1.94
CLK1P49759 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.96□□□□□ -1.94
CLK1P49759 RNU2-49P-201ENST00000410666 184 ntBASIC2.96□□□□□ -1.94
CLK1P49759 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.96□□□□□ -1.94
CLK1P49759 AC138393.2-201ENST00000414742 246 ntBASIC2.96□□□□□ -1.94
CLK1P49759 AC080125.1-201ENST00000414888 684 ntBASIC2.96□□□□□ -1.94
CLK1P49759 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms