Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.08□□□□□ -1.44
PRIM1P49642 FABP5P15-201ENST00000453566 214 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 SNORA84-201ENST00000459229 133 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 RPS20P22-201ENST00000473700 357 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.08□□□□□ -1.44
PRIM1P49642 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6.08□□□□□ -1.44
PRIM1P49642 HMGB3P16-201ENST00000508037 287 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 AC015795.1-201ENST00000513669 327 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 RN7SKP49-201ENST00000516675 260 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.08□□□□□ -1.44
PRIM1P49642 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC6.08□□□□□ -1.44
PRIM1P49642 BX005214.3-202ENST00000619809 325 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC6.08□□□□□ -1.44
PRIM1P49642 U4.7-201ENST00000638126 106 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRIM1P49642 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.08□□□□□ -1.44
PRIM1P49642 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.08□□□□□ -1.44
PRIM1P49642 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRIM1P49642 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRIM1P49642 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PRIM1P49642 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRIM1P49642 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.07□□□□□ -1.44
PRIM1P49642 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.07□□□□□ -1.44
PRIM1P49642 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRIM1P49642 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.07□□□□□ -1.44
PRIM1P49642 RNU6-428P-201ENST00000362942 107 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 RNU6-173P-201ENST00000364215 104 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 Y_RNA.273-201ENST00000364703 102 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 SNORA71.2-201ENST00000364941 134 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 Y_RNA.308-201ENST00000365043 101 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 RNU6-968P-201ENST00000384076 107 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 RNU4-30P-201ENST00000410245 143 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.07□□□□□ -1.44
PRIM1P49642 AC006026.2-201ENST00000457376 180 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC6.07□□□□□ -1.44
PRIM1P49642 AC020593.1-201ENST00000507399 299 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC6.07□□□□□ -1.44
PRIM1P49642 MRPL49P2-201ENST00000521066 465 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 RPL23AP88-201ENST00000605759 454 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 SCARNA4-202ENST00000625402 129 ntBASIC6.07□□□□□ -1.44
PRIM1P49642 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC6.07□□□□□ -1.44
PRIM1P49642 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRIM1P49642 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRIM1P49642 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRIM1P49642 AC107027.3-201ENST00000565095 3473 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.06□□□□□ -1.44
PRIM1P49642 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
PRIM1P49642 AC093591.2-201ENST00000565254 3843 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PRIM1P49642 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PRIM1P49642 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
PRIM1P49642 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PRIM1P49642 RNU6-137P-201ENST00000363680 108 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 RNU6-312P-201ENST00000364629 107 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 AL359837.1-201ENST00000381357 287 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 RNU6-318P-201ENST00000384283 103 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 RNU6-651P-201ENST00000411040 105 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 RPL23AP26-201ENST00000412728 464 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 OR2AH1P-201ENST00000425717 928 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 POLR2KP2-201ENST00000438155 177 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 AC140059.1-201ENST00000489238 361 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 RN7SL604P-201ENST00000492589 296 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 AL121603.1-201ENST00000553815 142 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PRIM1P49642 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.06□□□□□ -1.44
PRIM1P49642 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PRIM1P49642 AL353743.1-202ENST00000431724 1695 ntBASIC6.06□□□□□ -1.44
PRIM1P49642 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
PRIM1P49642 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PRIM1P49642 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PRIM1P49642 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PRIM1P49642 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PRIM1P49642 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PRIM1P49642 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PRIM1P49642 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PRIM1P49642 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.05□□□□□ -1.44
PRIM1P49642 Y_RNA.570-201ENST00000384750 101 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PRIM1P49642 AL590762.2-201ENST00000395798 571 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 RAB9AP3-201ENST00000412737 573 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.05□□□□□ -1.44
PRIM1P49642 RAB9AP1-201ENST00000449393 573 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 AL353705.4-201ENST00000449661 238 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 AC105137.1-201ENST00000484355 562 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 AC073073.1-201ENST00000493920 463 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 AC010265.1-201ENST00000513509 211 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC6.05□□□□□ -1.44
PRIM1P49642 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PRIM1P49642 MIR4308-201ENST00000580634 81 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 AC008749.1-201ENST00000597650 306 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PRIM1P49642 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PRIM1P49642 AC009541.1-201ENST00000438279 2662 ntBASIC6.05□□□□□ -1.44
PRIM1P49642 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PRIM1P49642 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
PRIM1P49642 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PRIM1P49642 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.05□□□□□ -1.44
PRIM1P49642 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PRIM1P49642 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms