Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC046143.2-201ENST00000609789 160 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 AC104010.1-201ENST00000616889 150 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CX3CR1P49238 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CX3CR1P49238 RNU6-188P-201ENST00000364207 107 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.01□□□□□ -2.09
CX3CR1P49238 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CX3CR1P49238 RPS20P2-201ENST00000402520 389 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AL591719.1-201ENST00000444669 744 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.01□□□□□ -2.09
CX3CR1P49238 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC126389.1-201ENST00000477436 290 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.01□□□□□ -2.09
CX3CR1P49238 RNA5SP112-201ENST00000515937 99 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 RNU6-1129P-201ENST00000515964 104 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 RN7SKP287-201ENST00000516546 266 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 RNU6-1183P-201ENST00000517054 60 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.01□□□□□ -2.09
CX3CR1P49238 IGLV3-17-201ENST00000519099 244 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 AP003461.1-201ENST00000528866 78 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.01□□□□□ -2.09
CX3CR1P49238 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC123904.2-201ENST00000548059 300 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 ELOCP32-201ENST00000548625 324 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.01□□□□□ -2.09
CX3CR1P49238 ISCA1P3-201ENST00000577104 373 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CX3CR1P49238 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.01□□□□□ -2.09
CX3CR1P49238 AC091965.5-201ENST00000624785 342 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CX3CR1P49238 HSPA8P4-201ENST00000511877 1920 ntBASIC2.01□□□□□ -2.09
CX3CR1P49238 CKAP2P1-201ENST00000555477 2049 ntBASIC2□□□□□ -2.09
CX3CR1P49238 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
CX3CR1P49238 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2□□□□□ -2.09
CX3CR1P49238 OR5H15-201ENST00000383696 930 ntBASIC2□□□□□ -2.09
CX3CR1P49238 U8.14-201ENST00000390843 143 ntBASIC2□□□□□ -2.09
CX3CR1P49238 SNORD23.1-201ENST00000408212 104 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2□□□□□ -2.09
CX3CR1P49238 HIGD1AP15-201ENST00000416198 280 ntBASIC2□□□□□ -2.09
CX3CR1P49238 NPM1P11-201ENST00000417106 855 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2□□□□□ -2.09
CX3CR1P49238 AL592045.1-201ENST00000429867 352 ntBASIC2□□□□□ -2.09
CX3CR1P49238 UBE2D3P1-201ENST00000436669 444 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AL008629.1-201ENST00000438615 184 ntBASIC2□□□□□ -2.09
CX3CR1P49238 MTND4P25-201ENST00000441039 533 ntBASIC2□□□□□ -2.09
CX3CR1P49238 NEFMP1-201ENST00000443423 1006 ntBASIC2□□□□□ -2.09
CX3CR1P49238 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2□□□□□ -2.09
CX3CR1P49238 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2□□□□□ -2.09
CX3CR1P49238 AC068587.2-201ENST00000478386 781 ntBASIC2□□□□□ -2.09
CX3CR1P49238 RN7SL636P-201ENST00000497504 294 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2□□□□□ -2.09
CX3CR1P49238 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2□□□□□ -2.09
CX3CR1P49238 SNORA25.11-201ENST00000515935 105 ntBASIC2□□□□□ -2.09
CX3CR1P49238 RNU7-193P-201ENST00000516723 65 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2□□□□□ -2.09
CX3CR1P49238 AC068587.4-201ENST00000533893 186 ntBASIC2□□□□□ -2.09
CX3CR1P49238 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CX3CR1P49238 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CX3CR1P49238 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2□□□□□ -2.09
CX3CR1P49238 ZNF321P-202ENST00000550843 495 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AC121758.2-201ENST00000553271 193 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2□□□□□ -2.09
CX3CR1P49238 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2□□□□□ -2.09
CX3CR1P49238 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2□□□□□ -2.09
CX3CR1P49238 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2□□□□□ -2.09
CX3CR1P49238 AC022022.2-201ENST00000602989 360 ntBASIC2□□□□□ -2.09
CX3CR1P49238 MTCYBP22-201ENST00000603788 447 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AC093424.1-201ENST00000604999 338 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AL160281.1-201ENST00000605307 311 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AC090970.3-201ENST00000612566 866 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AL161423.1-201ENST00000613700 262 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AC024581.2-201ENST00000619986 252 ntBASIC2□□□□□ -2.09
CX3CR1P49238 MIR6766-201ENST00000622641 72 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AL356266.1-201ENST00000623311 483 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AL160394.1-201ENST00000624765 724 ntBASIC2□□□□□ -2.09
CX3CR1P49238 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2□□□□□ -2.09
CX3CR1P49238 AC008993.2-201ENST00000631744 806 ntBASIC2□□□□□ -2.09
CX3CR1P49238 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.99□□□□□ -2.09
CX3CR1P49238 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.99□□□□□ -2.09
CX3CR1P49238 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CX3CR1P49238 RNU6-500P-201ENST00000362349 107 ntBASIC1.99□□□□□ -2.09
CX3CR1P49238 Y_RNA.18-201ENST00000362461 102 ntBASIC1.99□□□□□ -2.09
CX3CR1P49238 RNU6-288P-201ENST00000363690 104 ntBASIC1.99□□□□□ -2.09
CX3CR1P49238 RNU6-253P-201ENST00000384730 105 ntBASIC1.99□□□□□ -2.09
CX3CR1P49238 AL591416.1-201ENST00000404015 867 ntBASIC1.99□□□□□ -2.09
CX3CR1P49238 NDUFB4P4-201ENST00000404822 243 ntBASIC1.99□□□□□ -2.09
CX3CR1P49238 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CX3CR1P49238 OR51A5P-201ENST00000415429 942 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms