Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC004801.2-202ENST00000463559 283 ntBASIC2.46□□□□□ -2.02
ATRXP46100 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.46□□□□□ -2.02
ATRXP46100 MTND5P4-201ENST00000514978 288 ntBASIC2.46□□□□□ -2.02
ATRXP46100 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.46□□□□□ -2.02
ATRXP46100 CBX3P5-201ENST00000552017 521 ntBASIC2.46□□□□□ -2.02
ATRXP46100 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.46□□□□□ -2.02
ATRXP46100 AL161713.1-201ENST00000555538 145 ntBASIC2.46□□□□□ -2.02
ATRXP46100 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.46□□□□□ -2.02
ATRXP46100 AC007363.1-201ENST00000604736 620 ntBASIC2.46□□□□□ -2.02
ATRXP46100 AC113139.1-201ENST00000605049 239 ntBASIC2.46□□□□□ -2.02
ATRXP46100 uc_338.15-201ENST00000615470 191 ntBASIC2.46□□□□□ -2.02
ATRXP46100 AC136475.10-201ENST00000620253 385 ntBASIC2.46□□□□□ -2.02
ATRXP46100 AC091925.2-201ENST00000625059 256 ntBASIC2.46□□□□□ -2.02
ATRXP46100 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
ATRXP46100 XPOTP1-201ENST00000443317 2398 ntBASIC2.46□□□□□ -2.02
ATRXP46100 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
ATRXP46100 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
ATRXP46100 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.46□□□□□ -2.02
ATRXP46100 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.46□□□□□ -2.02
ATRXP46100 AL049555.1-201ENST00000562834 1933 ntBASIC2.46□□□□□ -2.02
ATRXP46100 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ATRXP46100 Y_RNA.58-201ENST00000362807 102 ntBASIC2.46□□□□□ -2.02
ATRXP46100 Y_RNA.154-201ENST00000363624 102 ntBASIC2.46□□□□□ -2.02
ATRXP46100 RNU5A-8P-201ENST00000364102 114 ntBASIC2.46□□□□□ -2.02
ATRXP46100 RNY3P1-201ENST00000365085 102 ntBASIC2.46□□□□□ -2.02
ATRXP46100 RNY3-201ENST00000365484 102 ntBASIC2.46□□□□□ -2.02
ATRXP46100 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.46□□□□□ -2.02
ATRXP46100 Y_RNA.481-201ENST00000384373 102 ntBASIC2.46□□□□□ -2.02
ATRXP46100 Y_RNA.490-201ENST00000384413 102 ntBASIC2.46□□□□□ -2.02
ATRXP46100 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.46□□□□□ -2.02
ATRXP46100 AC007283.2-201ENST00000424739 197 ntBASIC2.46□□□□□ -2.02
ATRXP46100 AC024082.2-201ENST00000434771 238 ntBASIC2.46□□□□□ -2.02
ATRXP46100 SNRPFP4-201ENST00000456366 242 ntBASIC2.46□□□□□ -2.02
ATRXP46100 AC106872.3-201ENST00000495104 446 ntBASIC2.46□□□□□ -2.02
ATRXP46100 RPL23AP55-201ENST00000498163 452 ntBASIC2.46□□□□□ -2.02
ATRXP46100 Y_RNA.682-201ENST00000516457 100 ntBASIC2.46□□□□□ -2.02
ATRXP46100 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.46□□□□□ -2.02
ATRXP46100 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ATRXP46100 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.46□□□□□ -2.02
ATRXP46100 ARL2BPP2-201ENST00000550907 489 ntBASIC2.46□□□□□ -2.02
ATRXP46100 MIR4738-201ENST00000579134 87 ntBASIC2.46□□□□□ -2.02
ATRXP46100 DUSP12P1-201ENST00000612874 516 ntBASIC2.46□□□□□ -2.02
ATRXP46100 RMST_2.1-201ENST00000617263 136 ntBASIC2.46□□□□□ -2.02
ATRXP46100 uc_338.11-201ENST00000619132 160 ntBASIC2.46□□□□□ -2.02
ATRXP46100 AC091903.1-201ENST00000624322 454 ntBASIC2.46□□□□□ -2.02
ATRXP46100 AC100810.6-201ENST00000638068 285 ntBASIC2.46□□□□□ -2.02
ATRXP46100 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ATRXP46100 AL592437.2-201ENST00000421655 2434 ntBASIC2.45□□□□□ -2.02
ATRXP46100 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ATRXP46100 RNU6-661P-201ENST00000362409 107 ntBASIC2.45□□□□□ -2.02
ATRXP46100 Y_RNA.30-201ENST00000362572 97 ntBASIC2.45□□□□□ -2.02
ATRXP46100 RNA5SP322-201ENST00000363617 119 ntBASIC2.45□□□□□ -2.02
ATRXP46100 Y_RNA.582-201ENST00000391023 95 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AC078974.1-201ENST00000411597 223 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AC138393.2-201ENST00000414742 246 ntBASIC2.45□□□□□ -2.02
ATRXP46100 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.45□□□□□ -2.02
ATRXP46100 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.45□□□□□ -2.02
ATRXP46100 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.45□□□□□ -2.02
ATRXP46100 AC009238.1-201ENST00000442165 424 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.45□□□□□ -2.02
ATRXP46100 AC009237.6-201ENST00000446969 424 ntBASIC2.45□□□□□ -2.02
ATRXP46100 HAR1A.1-201ENST00000459583 118 ntBASIC2.45□□□□□ -2.02
ATRXP46100 RPL31P58-201ENST00000469001 379 ntBASIC2.45□□□□□ -2.02
ATRXP46100 RN7SL636P-201ENST00000497504 294 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.45□□□□□ -2.02
ATRXP46100 TRMT112P2-201ENST00000512910 132 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.45□□□□□ -2.02
ATRXP46100 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.45□□□□□ -2.02
ATRXP46100 AC107918.3-201ENST00000533272 382 ntBASIC2.45□□□□□ -2.02
ATRXP46100 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.45□□□□□ -2.02
ATRXP46100 SULT1C2P1-202ENST00000562418 459 ntBASIC2.45□□□□□ -2.02
ATRXP46100 MIR4285-201ENST00000581001 85 ntBASIC2.45□□□□□ -2.02
ATRXP46100 MIR3672-201ENST00000584290 82 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AL391646.1-201ENST00000603860 190 ntBASIC2.45□□□□□ -2.02
ATRXP46100 TPTEP1-208ENST00000636884 213 ntBASIC2.45□□□□□ -2.02
ATRXP46100 MTND4P12-201ENST00000498999 1377 ntBASIC2.45□□□□□ -2.02
ATRXP46100 RLIMP2-201ENST00000427891 1563 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AC092326.2-201ENST00000624772 1561 ntBASIC2.45□□□□□ -2.02
ATRXP46100 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
ATRXP46100 RNU6-28P-201ENST00000362378 107 ntBASIC2.45□□□□□ -2.02
ATRXP46100 Y_RNA.191-201ENST00000363972 113 ntBASIC2.45□□□□□ -2.02
ATRXP46100 Y_RNA.234-201ENST00000364409 97 ntBASIC2.45□□□□□ -2.02
ATRXP46100 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ATRXP46100 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ATRXP46100 SSXP10-201ENST00000402595 565 ntBASIC2.45□□□□□ -2.02
ATRXP46100 RNU6-908P-201ENST00000410160 94 ntBASIC2.45□□□□□ -2.02
ATRXP46100 SSXP9-201ENST00000417503 292 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AL138785.1-201ENST00000425821 331 ntBASIC2.45□□□□□ -2.02
ATRXP46100 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.45□□□□□ -2.02
ATRXP46100 AL365400.1-201ENST00000431854 640 ntBASIC2.45□□□□□ -2.02
ATRXP46100 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AC002486.1-201ENST00000435098 391 ntBASIC2.45□□□□□ -2.02
ATRXP46100 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.45□□□□□ -2.02
ATRXP46100 Z82190.1-201ENST00000454534 490 ntBASIC2.45□□□□□ -2.02
ATRXP46100 RNU6-261P-201ENST00000459506 102 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AC104472.2-201ENST00000469035 601 ntBASIC2.45□□□□□ -2.02
ATRXP46100 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.45□□□□□ -2.02
ATRXP46100 AC104806.1-201ENST00000508720 308 ntBASIC2.45□□□□□ -2.02
ATRXP46100 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms