Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RN7SKP227-201ENST00000364445 330 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 SNORA20-201ENST00000384662 132 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 SNORD96B-201ENST00000386148 79 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 RNU2-2P-201ENST00000410396 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 USP9YP7-201ENST00000436723 430 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 RPL23AP58-201ENST00000440453 469 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 IFNA11P-201ENST00000446352 526 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 AC073587.1-201ENST00000447093 876 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 MRPS10P1-201ENST00000448483 130 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 AC074290.1-201ENST00000448883 135 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 EEF1B2P7-201ENST00000451177 676 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 USP9YP32-201ENST00000452432 430 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 ZFRP1-201ENST00000457579 2970 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 RPL23AP2-201ENST00000471227 466 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CHRNA4P43681 Y_RNA.694-201ENST00000516677 117 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.68□□□□□ -1.66
CHRNA4P43681 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.68□□□□□ -1.66
CHRNA4P43681 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.68□□□□□ -1.66
CHRNA4P43681 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 RNU2-4P-201ENST00000606190 192 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.15-201ENST00000611544 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.16-201ENST00000613119 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.12-201ENST00000613778 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.9-201ENST00000615427 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.11-201ENST00000616345 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.2-201ENST00000616535 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.3-201ENST00000617785 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.19-201ENST00000618602 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 RNU2-1-201ENST00000618664 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.6-201ENST00000619225 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.5-201ENST00000619465 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 U2.10-201ENST00000620268 191 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA4P43681 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.68□□□□□ -1.66
CHRNA4P43681 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 AC107027.3-201ENST00000565095 3473 ntBASIC4.68□□□□□ -1.66
CHRNA4P43681 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CHRNA4P43681 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CHRNA4P43681 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CHRNA4P43681 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CHRNA4P43681 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA4P43681 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.68□□□□□ -1.66
CHRNA4P43681 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA4P43681 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA4P43681 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA4P43681 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA4P43681 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRNA4P43681 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA4P43681 RNU4-11P-201ENST00000365287 132 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 Z74021.1-201ENST00000423610 407 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRNA4P43681 RPS26P2-201ENST00000440331 348 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRNA4P43681 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRNA4P43681 RNU1-86P-201ENST00000516108 154 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 RNU6-168P-201ENST00000516189 101 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 RNU1-107P-201ENST00000516617 154 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRNA4P43681 MIR5582-201ENST00000579697 68 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 BPIFA4P-203ENST00000603168 689 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 AC004825.2-201ENST00000616634 455 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA4P43681 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA4P43681 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRNA4P43681 SAGE4P-201ENST00000442271 3381 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 AP001642.1-201ENST00000624727 2117 ntBASIC4.67□□□□□ -1.66
CHRNA4P43681 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA4P43681 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA4P43681 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA4P43681 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA4P43681 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA4P43681 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CHRNA4P43681 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRNA4P43681 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRNA4P43681 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
CHRNA4P43681 Y_RNA.182-201ENST00000363880 111 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 U8.7-201ENST00000364940 136 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 RNU6-1144P-201ENST00000384247 104 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 RNU6-318P-201ENST00000384283 103 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 Y_RNA.542-201ENST00000384641 111 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 Y_RNA.570-201ENST00000384750 101 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 SNORA40.19-201ENST00000390846 128 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 RN7SKP267-201ENST00000410381 285 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 AC063979.1-201ENST00000415539 377 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRNA4P43681 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.66□□□□□ -1.66
CHRNA4P43681 AL049745.1-201ENST00000433953 286 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 snoU13.7-201ENST00000459220 104 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRNA4P43681 RAC1P5-201ENST00000512182 576 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 RNU6-589P-201ENST00000516485 107 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 RN7SKP258-201ENST00000517151 304 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRNA4P43681 ATP5F1P5-201ENST00000526403 760 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 AL034351.1-201ENST00000605288 668 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 AC100827.5-201ENST00000615883 426 ntBASIC4.66□□□□□ -1.66
CHRNA4P43681 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.66□□□□□ -1.66
CHRNA4P43681 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CHRNA4P43681 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms