Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC136475.10-201ENST00000620253 385 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AC110079.1-202ENST00000635213 138 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AC068137.4-201ENST00000638485 296 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCLP35914 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HMGCLP35914 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HMGCLP35914 RNA5SP68-201ENST00000363885 119 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 SMIM11P1-201ENST00000369586 178 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
HMGCLP35914 MIR558-201ENST00000384920 94 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 RPL17P50-201ENST00000396131 546 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 RPS4XP8-201ENST00000402039 771 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 C1DP2-201ENST00000418167 426 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AC016907.1-201ENST00000419483 435 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 PIGFP2-201ENST00000421400 651 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGCLP35914 ISCA1P1-201ENST00000426679 387 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AL590383.1-201ENST00000428602 75 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGCLP35914 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.51□□□□□ -2.01
HMGCLP35914 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGCLP35914 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 DNAJC19P4-201ENST00000440115 345 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AC079448.1-201ENST00000449377 373 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGCLP35914 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.51□□□□□ -2.01
HMGCLP35914 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.51□□□□□ -2.01
HMGCLP35914 MTND2P33-201ENST00000506452 1031 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGCLP35914 MTCO3P7-201ENST00000510008 774 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AC114797.1-201ENST00000514003 728 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 RNU4-29P-201ENST00000515943 174 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 Vault.3-201ENST00000516676 95 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 RNU6-430P-201ENST00000517078 107 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 RNU6-840P-201ENST00000517275 65 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.51□□□□□ -2.01
HMGCLP35914 OR5BN1P-201ENST00000532955 829 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AP002453.2-201ENST00000533503 320 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HMGCLP35914 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HMGCLP35914 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGCLP35914 MTCYBP33-201ENST00000575007 1130 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AC103987.3-201ENST00000582071 292 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AC174048.1-201ENST00000603389 144 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AC136601.2-201ENST00000604356 474 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AL161729.4-201ENST00000604650 476 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AL589743.7-201ENST00000612637 233 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AC005332.10-201ENST00000612725 619 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 MIR6817-201ENST00000615588 66 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 AC068880.5-201ENST00000624331 290 ntBASIC2.51□□□□□ -2.01
HMGCLP35914 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HMGCLP35914 ZNF271P-202ENST00000465539 1970 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HMGCLP35914 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HMGCLP35914 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HMGCLP35914 SNORD56.2-201ENST00000363242 71 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 RNU6-1103P-201ENST00000384150 107 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 RNU6-39P-201ENST00000384344 107 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 SNORD116-4-201ENST00000384733 96 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 MIR634-201ENST00000385208 97 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 RNU6-817P-201ENST00000391083 104 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 NDUFS5P1-201ENST00000405668 289 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGCLP35914 RPS15AP12-201ENST00000419498 388 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 RAC1P6-201ENST00000423911 575 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AC007283.2-201ENST00000424739 197 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 RPL7L1P10-201ENST00000427790 463 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 MED13P1-201ENST00000428342 171 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AC073614.1-201ENST00000438690 650 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGCLP35914 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGCLP35914 MTND1P27-201ENST00000451117 902 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGCLP35914 AC073901.1-201ENST00000462471 408 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.5□□□□□ -2.01
HMGCLP35914 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGCLP35914 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.5□□□□□ -2.01
HMGCLP35914 RNA5SP320-201ENST00000516263 124 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 CKS1BP7-201ENST00000522230 235 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.5□□□□□ -2.01
HMGCLP35914 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.5□□□□□ -2.01
HMGCLP35914 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGCLP35914 AC010546.1-201ENST00000569391 485 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 MIR3913-1-201ENST00000577744 102 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AC103810.1-201ENST00000579873 453 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AC087683.1-201ENST00000591187 441 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.5□□□□□ -2.01
HMGCLP35914 AC245014.2-201ENST00000603689 287 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AL136363.2-201ENST00000604173 851 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AL136363.1-201ENST00000605349 337 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AC246785.4-201ENST00000605374 287 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 NDUFA8P1-201ENST00000605525 367 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AL365204.3-201ENST00000612448 685 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AC104237.2-201ENST00000612456 443 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AP001486.3-201ENST00000615334 372 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 AC007998.5-201ENST00000622938 237 ntBASIC2.5□□□□□ -2.01
HMGCLP35914 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
HMGCLP35914 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms