Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RPL31P41-201ENST00000477967 372 ntBASIC3.28□□□□□ -1.88
KRT9P35527 AC026801.1-201ENST00000497178 464 ntBASIC3.28□□□□□ -1.88
KRT9P35527 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT9P35527 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT9P35527 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.28□□□□□ -1.88
KRT9P35527 MTCO2P4-201ENST00000517968 247 ntBASIC3.28□□□□□ -1.88
KRT9P35527 AC025755.1-201ENST00000521306 278 ntBASIC3.28□□□□□ -1.88
KRT9P35527 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRT9P35527 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT9P35527 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.28□□□□□ -1.88
KRT9P35527 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT9P35527 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.28□□□□□ -1.88
KRT9P35527 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT9P35527 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT9P35527 RPL23AP78-201ENST00000599928 470 ntBASIC3.28□□□□□ -1.88
KRT9P35527 AC010620.2-201ENST00000600135 313 ntBASIC3.28□□□□□ -1.88
KRT9P35527 U6atac.1-201ENST00000616025 117 ntBASIC3.28□□□□□ -1.88
KRT9P35527 AC025034.2-201ENST00000623264 286 ntBASIC3.28□□□□□ -1.88
KRT9P35527 AC093648.1-201ENST00000623546 606 ntBASIC3.28□□□□□ -1.88
KRT9P35527 AL157786.1-207ENST00000627771 695 ntBASIC3.28□□□□□ -1.88
KRT9P35527 U6.99-201ENST00000637524 83 ntBASIC3.28□□□□□ -1.88
KRT9P35527 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRT9P35527 ZNF519P1-201ENST00000449011 1626 ntBASIC3.28□□□□□ -1.88
KRT9P35527 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
KRT9P35527 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.27□□□□□ -1.89
KRT9P35527 MTND5P1-201ENST00000445440 1375 ntBASIC3.27□□□□□ -1.89
KRT9P35527 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRT9P35527 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRT9P35527 Y_RNA.6-201ENST00000362350 114 ntBASIC3.27□□□□□ -1.89
KRT9P35527 RNU6-1097P-201ENST00000363586 107 ntBASIC3.27□□□□□ -1.89
KRT9P35527 SNORA38.1-201ENST00000364172 131 ntBASIC3.27□□□□□ -1.89
KRT9P35527 SNORA9-201ENST00000384215 133 ntBASIC3.27□□□□□ -1.89
KRT9P35527 RNU6-750P-201ENST00000390946 107 ntBASIC3.27□□□□□ -1.89
KRT9P35527 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.27□□□□□ -1.89
KRT9P35527 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 RNU2-16P-201ENST00000410712 136 ntBASIC3.27□□□□□ -1.89
KRT9P35527 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT9P35527 AL358075.3-201ENST00000426289 226 ntBASIC3.27□□□□□ -1.89
KRT9P35527 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 MTND1P4-201ENST00000435196 415 ntBASIC3.27□□□□□ -1.89
KRT9P35527 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT9P35527 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.27□□□□□ -1.89
KRT9P35527 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 AC113155.1-201ENST00000511141 769 ntBASIC3.27□□□□□ -1.89
KRT9P35527 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 SNORA74D-201ENST00000516404 141 ntBASIC3.27□□□□□ -1.89
KRT9P35527 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.27□□□□□ -1.89
KRT9P35527 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 AP002963.1-201ENST00000530590 184 ntBASIC3.27□□□□□ -1.89
KRT9P35527 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.27□□□□□ -1.89
KRT9P35527 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 AL391840.1-201ENST00000571144 367 ntBASIC3.27□□□□□ -1.89
KRT9P35527 MIR1273C-201ENST00000578669 77 ntBASIC3.27□□□□□ -1.89
KRT9P35527 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT9P35527 AC078899.3-201ENST00000599065 212 ntBASIC3.27□□□□□ -1.89
KRT9P35527 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT9P35527 AC012119.1-201ENST00000603184 222 ntBASIC3.27□□□□□ -1.89
KRT9P35527 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT9P35527 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
KRT9P35527 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT9P35527 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
KRT9P35527 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
KRT9P35527 Y_RNA.33-201ENST00000362591 102 ntBASIC3.26□□□□□ -1.89
KRT9P35527 RNU6-181P-201ENST00000363225 107 ntBASIC3.26□□□□□ -1.89
KRT9P35527 RNU6-74P-201ENST00000384235 107 ntBASIC3.26□□□□□ -1.89
KRT9P35527 CISD1P1-201ENST00000393907 327 ntBASIC3.26□□□□□ -1.89
KRT9P35527 DEFB108C-201ENST00000400154 252 ntBASIC3.26□□□□□ -1.89
KRT9P35527 AL122016.1-201ENST00000403365 367 ntBASIC3.26□□□□□ -1.89
KRT9P35527 RNU6-1025P-201ENST00000410629 104 ntBASIC3.26□□□□□ -1.89
KRT9P35527 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT9P35527 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT9P35527 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT9P35527 AC009296.1-201ENST00000443146 155 ntBASIC3.26□□□□□ -1.89
KRT9P35527 DPPA3P1-201ENST00000448050 469 ntBASIC3.26□□□□□ -1.89
KRT9P35527 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT9P35527 C1DP4-201ENST00000455429 424 ntBASIC3.26□□□□□ -1.89
KRT9P35527 RN7SL504P-201ENST00000494496 287 ntBASIC3.26□□□□□ -1.89
KRT9P35527 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT9P35527 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRT9P35527 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.26□□□□□ -1.89
KRT9P35527 RNU6-572P-201ENST00000516724 80 ntBASIC3.26□□□□□ -1.89
KRT9P35527 RNU6-445P-201ENST00000516949 107 ntBASIC3.26□□□□□ -1.89
KRT9P35527 RNU6-1183P-201ENST00000517054 60 ntBASIC3.26□□□□□ -1.89
KRT9P35527 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.26□□□□□ -1.89
KRT9P35527 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.26□□□□□ -1.89
KRT9P35527 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT9P35527 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.26□□□□□ -1.89
KRT9P35527 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.26□□□□□ -1.89
KRT9P35527 AC011471.1-201ENST00000585766 187 ntBASIC3.26□□□□□ -1.89
KRT9P35527 AC008521.1-201ENST00000587471 187 ntBASIC3.26□□□□□ -1.89
KRT9P35527 AL136363.2-201ENST00000604173 851 ntBASIC3.26□□□□□ -1.89
KRT9P35527 AL160281.1-201ENST00000605307 311 ntBASIC3.26□□□□□ -1.89
KRT9P35527 AL589743.7-201ENST00000612637 233 ntBASIC3.26□□□□□ -1.89
KRT9P35527 AC091834.1-201ENST00000614543 472 ntBASIC3.26□□□□□ -1.89
KRT9P35527 U6.42-201ENST00000618440 107 ntBASIC3.26□□□□□ -1.89
KRT9P35527 MIR3199-2-201ENST00000636243 86 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms