Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC1P35052 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC1P35052 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.83□□□□□ -1.64
GPC1P35052 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC1P35052 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GPC1P35052 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC1P35052 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC1P35052 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
GPC1P35052 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC1P35052 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
GPC1P35052 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC1P35052 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.82□□□□□ -1.64
GPC1P35052 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC1P35052 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC1P35052 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC1P35052 RNA5SP183-201ENST00000362452 119 ntBASIC4.82□□□□□ -1.64
GPC1P35052 RN7SKP160-201ENST00000363804 340 ntBASIC4.82□□□□□ -1.64
GPC1P35052 RNU1-43P-201ENST00000365052 165 ntBASIC4.82□□□□□ -1.64
GPC1P35052 RNU6-1145P-201ENST00000384246 107 ntBASIC4.82□□□□□ -1.64
GPC1P35052 SNORA40-201ENST00000388090 126 ntBASIC4.82□□□□□ -1.64
GPC1P35052 RNU2-68P-201ENST00000410878 191 ntBASIC4.82□□□□□ -1.64
GPC1P35052 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.82□□□□□ -1.64
GPC1P35052 AC098614.2-201ENST00000426040 255 ntBASIC4.82□□□□□ -1.64
GPC1P35052 BTF3P11-201ENST00000426582 477 ntBASIC4.82□□□□□ -1.64
GPC1P35052 RPS15AP5-201ENST00000436276 388 ntBASIC4.82□□□□□ -1.64
GPC1P35052 Z82210.1-201ENST00000440037 231 ntBASIC4.82□□□□□ -1.64
GPC1P35052 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.82□□□□□ -1.64
GPC1P35052 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.82□□□□□ -1.64
GPC1P35052 AC009127.1-201ENST00000467090 155 ntBASIC4.82□□□□□ -1.64
GPC1P35052 KC877373.1-201ENST00000479066 408 ntBASIC4.82□□□□□ -1.64
GPC1P35052 RN7SL346P-201ENST00000491561 294 ntBASIC4.82□□□□□ -1.64
GPC1P35052 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.82□□□□□ -1.64
GPC1P35052 RNU6-971P-201ENST00000516920 106 ntBASIC4.82□□□□□ -1.64
GPC1P35052 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.82□□□□□ -1.64
GPC1P35052 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.82□□□□□ -1.64
GPC1P35052 MIR548X2-201ENST00000579776 100 ntBASIC4.82□□□□□ -1.64
GPC1P35052 AL590392.1-201ENST00000604960 446 ntBASIC4.82□□□□□ -1.64
GPC1P35052 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.82□□□□□ -1.64
GPC1P35052 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC1P35052 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC1P35052 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
GPC1P35052 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.82□□□□□ -1.64
GPC1P35052 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.82□□□□□ -1.64
GPC1P35052 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
GPC1P35052 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC1P35052 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC1P35052 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GPC1P35052 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.82□□□□□ -1.64
GPC1P35052 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC1P35052 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
GPC1P35052 AC092593.1-201ENST00000515413 1815 ntBASIC4.81□□□□□ -1.64
GPC1P35052 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC1P35052 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC1P35052 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC1P35052 RNU6-1325P-201ENST00000364905 105 ntBASIC4.81□□□□□ -1.64
GPC1P35052 SNORA2.3-201ENST00000383920 135 ntBASIC4.81□□□□□ -1.64
GPC1P35052 RNU6-213P-201ENST00000384051 104 ntBASIC4.81□□□□□ -1.64
GPC1P35052 AC007738.1-201ENST00000413892 348 ntBASIC4.81□□□□□ -1.64
GPC1P35052 AL355433.1-201ENST00000422804 300 ntBASIC4.81□□□□□ -1.64
GPC1P35052 RNA5SP103-201ENST00000459503 118 ntBASIC4.81□□□□□ -1.64
GPC1P35052 SNRPGP7-201ENST00000469016 106 ntBASIC4.81□□□□□ -1.64
GPC1P35052 RPS26P39-201ENST00000469206 341 ntBASIC4.81□□□□□ -1.64
GPC1P35052 RN7SL177P-201ENST00000476596 299 ntBASIC4.81□□□□□ -1.64
GPC1P35052 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.81□□□□□ -1.64
GPC1P35052 RNU6-191P-201ENST00000516295 94 ntBASIC4.81□□□□□ -1.64
GPC1P35052 IGKV2-18-201ENST00000522607 343 ntBASIC4.81□□□□□ -1.64
GPC1P35052 AC055872.1-201ENST00000570978 278 ntBASIC4.81□□□□□ -1.64
GPC1P35052 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC1P35052 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.81□□□□□ -1.64
GPC1P35052 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC1P35052 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
GPC1P35052 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC1P35052 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC1P35052 AL391516.1-201ENST00000554380 2449 ntBASIC4.81□□□□□ -1.64
GPC1P35052 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC1P35052 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GPC1P35052 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC1P35052 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.8□□□□□ -1.64
GPC1P35052 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GPC1P35052 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.8□□□□□ -1.64
GPC1P35052 FTLP6-201ENST00000355274 422 ntBASIC4.8□□□□□ -1.64
GPC1P35052 Y_RNA.127-201ENST00000363386 109 ntBASIC4.8□□□□□ -1.64
GPC1P35052 RNA5SP235-201ENST00000365411 114 ntBASIC4.8□□□□□ -1.64
GPC1P35052 UBBP2-201ENST00000376781 231 ntBASIC4.8□□□□□ -1.64
GPC1P35052 RNU6-142P-201ENST00000384019 107 ntBASIC4.8□□□□□ -1.64
GPC1P35052 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
GPC1P35052 RNU6-159P-201ENST00000391080 106 ntBASIC4.8□□□□□ -1.64
GPC1P35052 MIR1182-201ENST00000408363 97 ntBASIC4.8□□□□□ -1.64
GPC1P35052 RNU6-1245P-201ENST00000411130 106 ntBASIC4.8□□□□□ -1.64
GPC1P35052 AC104333.2-201ENST00000422630 192 ntBASIC4.8□□□□□ -1.64
GPC1P35052 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.8□□□□□ -1.64
GPC1P35052 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.8□□□□□ -1.64
GPC1P35052 TPT1P12-201ENST00000448968 492 ntBASIC4.8□□□□□ -1.64
GPC1P35052 AL451050.1-201ENST00000450126 415 ntBASIC4.8□□□□□ -1.64
GPC1P35052 AC009963.2-201ENST00000453431 138 ntBASIC4.8□□□□□ -1.64
GPC1P35052 AC005840.1-201ENST00000498412 377 ntBASIC4.8□□□□□ -1.64
GPC1P35052 SNORA43.2-201ENST00000516652 128 ntBASIC4.8□□□□□ -1.64
GPC1P35052 SUMO2P18-201ENST00000518873 252 ntBASIC4.8□□□□□ -1.64
GPC1P35052 MIR4489-201ENST00000578869 62 ntBASIC4.8□□□□□ -1.64
GPC1P35052 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms