Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CKS2P33552 Y_RNA.510-201ENST00000384511 114 ntBASIC0.88□□□□□ -2.27
CKS2P33552 RPL22P22-201ENST00000395439 379 ntBASIC0.88□□□□□ -2.27
CKS2P33552 AL590084.1-201ENST00000407885 387 ntBASIC0.88□□□□□ -2.27
CKS2P33552 MIR1262-201ENST00000408276 93 ntBASIC0.88□□□□□ -2.27
CKS2P33552 RNU2-48P-201ENST00000410694 191 ntBASIC0.88□□□□□ -2.27
CKS2P33552 RNU6-575P-201ENST00000411326 105 ntBASIC0.88□□□□□ -2.27
CKS2P33552 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.88□□□□□ -2.27
CKS2P33552 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.88□□□□□ -2.27
CKS2P33552 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.88□□□□□ -2.27
CKS2P33552 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.88□□□□□ -2.27
CKS2P33552 HMGB1P31-201ENST00000437242 427 ntBASIC0.88□□□□□ -2.27
CKS2P33552 MTCO2P20-201ENST00000437339 673 ntBASIC0.88□□□□□ -2.27
CKS2P33552 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.88□□□□□ -2.27
CKS2P33552 AC112771.1-201ENST00000463581 102 ntBASIC0.88□□□□□ -2.27
CKS2P33552 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.88□□□□□ -2.27
CKS2P33552 RPS15AP17-201ENST00000470598 390 ntBASIC0.88□□□□□ -2.27
CKS2P33552 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.88□□□□□ -2.27
CKS2P33552 AC010460.2-201ENST00000509054 677 ntBASIC0.88□□□□□ -2.27
CKS2P33552 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.88□□□□□ -2.27
CKS2P33552 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.88□□□□□ -2.27
CKS2P33552 COPS8P3-201ENST00000526024 482 ntBASIC0.88□□□□□ -2.27
CKS2P33552 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.88□□□□□ -2.27
CKS2P33552 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.88□□□□□ -2.27
CKS2P33552 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.88□□□□□ -2.27
CKS2P33552 AC073544.2-201ENST00000601155 540 ntBASIC0.88□□□□□ -2.27
CKS2P33552 AC116312.1-201ENST00000606841 314 ntBASIC0.88□□□□□ -2.27
CKS2P33552 AC010133.1-201ENST00000615809 842 ntBASIC0.88□□□□□ -2.27
CKS2P33552 AC008121.3-201ENST00000618726 433 ntBASIC0.88□□□□□ -2.27
CKS2P33552 AP003476.1-201ENST00000623984 516 ntBASIC0.88□□□□□ -2.27
CKS2P33552 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CKS2P33552 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CKS2P33552 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CKS2P33552 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CKS2P33552 MIR449A-201ENST00000362113 91 ntBASIC0.87□□□□□ -2.27
CKS2P33552 RNU6-661P-201ENST00000362409 107 ntBASIC0.87□□□□□ -2.27
CKS2P33552 Y_RNA.245-201ENST00000364493 95 ntBASIC0.87□□□□□ -2.27
CKS2P33552 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CKS2P33552 RNU11-3P-201ENST00000391111 133 ntBASIC0.87□□□□□ -2.27
CKS2P33552 RNU1-78P-201ENST00000391248 165 ntBASIC0.87□□□□□ -2.27
CKS2P33552 TPMTP3-201ENST00000411928 735 ntBASIC0.87□□□□□ -2.27
CKS2P33552 AL591704.2-201ENST00000421658 181 ntBASIC0.87□□□□□ -2.27
CKS2P33552 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.87□□□□□ -2.27
CKS2P33552 AC092648.1-201ENST00000425870 423 ntBASIC0.87□□□□□ -2.27
CKS2P33552 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CKS2P33552 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.87□□□□□ -2.27
CKS2P33552 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.87□□□□□ -2.27
CKS2P33552 RPS29P28-201ENST00000446439 141 ntBASIC0.87□□□□□ -2.27
CKS2P33552 SNORD97-201ENST00000459187 142 ntBASIC0.87□□□□□ -2.27
CKS2P33552 OR2A41P-201ENST00000473586 105 ntBASIC0.87□□□□□ -2.27
CKS2P33552 UBL5P3-201ENST00000475112 231 ntBASIC0.87□□□□□ -2.27
CKS2P33552 RPS29P21-201ENST00000496272 170 ntBASIC0.87□□□□□ -2.27
CKS2P33552 AC091860.1-201ENST00000505723 432 ntBASIC0.87□□□□□ -2.27
CKS2P33552 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.87□□□□□ -2.27
CKS2P33552 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.87□□□□□ -2.27
CKS2P33552 RNU6-295P-201ENST00000516901 104 ntBASIC0.87□□□□□ -2.27
CKS2P33552 RNU1-92P-201ENST00000517017 135 ntBASIC0.87□□□□□ -2.27
CKS2P33552 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.87□□□□□ -2.27
CKS2P33552 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.87□□□□□ -2.27
CKS2P33552 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.87□□□□□ -2.27
CKS2P33552 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.87□□□□□ -2.27
CKS2P33552 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.87□□□□□ -2.27
CKS2P33552 BNIP3P27-201ENST00000599991 412 ntBASIC0.87□□□□□ -2.27
CKS2P33552 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.87□□□□□ -2.27
CKS2P33552 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CKS2P33552 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CKS2P33552 AP005901.5-201ENST00000545779 1796 ntBASIC0.87□□□□□ -2.27
CKS2P33552 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CKS2P33552 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CKS2P33552 RNU6-1032P-201ENST00000384100 107 ntBASIC0.86□□□□□ -2.27
CKS2P33552 RNA5SP100-201ENST00000410903 110 ntBASIC0.86□□□□□ -2.27
CKS2P33552 RNA5SP59-201ENST00000410922 110 ntBASIC0.86□□□□□ -2.27
CKS2P33552 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.86□□□□□ -2.27
CKS2P33552 VN1R42P-201ENST00000424651 344 ntBASIC0.86□□□□□ -2.27
CKS2P33552 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.86□□□□□ -2.27
CKS2P33552 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.86□□□□□ -2.27
CKS2P33552 AC007000.2-201ENST00000442564 487 ntBASIC0.86□□□□□ -2.27
CKS2P33552 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.86□□□□□ -2.27
CKS2P33552 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.86□□□□□ -2.27
CKS2P33552 OFD1P3Y-201ENST00000453312 783 ntBASIC0.86□□□□□ -2.27
CKS2P33552 GTF2IP12-201ENST00000456547 356 ntBASIC0.86□□□□□ -2.27
CKS2P33552 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.86□□□□□ -2.27
CKS2P33552 RNU7-140P-201ENST00000459546 60 ntBASIC0.86□□□□□ -2.27
CKS2P33552 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CKS2P33552 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.86□□□□□ -2.27
CKS2P33552 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.86□□□□□ -2.27
CKS2P33552 SNORA48.9-201ENST00000516419 162 ntBASIC0.86□□□□□ -2.27
CKS2P33552 RNU6-703P-201ENST00000516946 107 ntBASIC0.86□□□□□ -2.27
CKS2P33552 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.86□□□□□ -2.27
CKS2P33552 AP005660.1-201ENST00000522972 293 ntBASIC0.86□□□□□ -2.27
CKS2P33552 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.86□□□□□ -2.27
CKS2P33552 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.86□□□□□ -2.27
CKS2P33552 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.86□□□□□ -2.27
CKS2P33552 AL645939.4-201ENST00000604495 135 ntBASIC0.86□□□□□ -2.27
CKS2P33552 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.86□□□□□ -2.27
CKS2P33552 AC084824.4-201ENST00000620106 731 ntBASIC0.86□□□□□ -2.27
CKS2P33552 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.86□□□□□ -2.27
CKS2P33552 AC138627.2-201ENST00000624202 601 ntBASIC0.86□□□□□ -2.27
CKS2P33552 AC091965.5-201ENST00000624785 342 ntBASIC0.86□□□□□ -2.27
CKS2P33552 AC017037.3-201ENST00000625016 472 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms