Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNGA1P29973 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.14□□□□□ -1.75
CNGA1P29973 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNGA1P29973 NCAPGP1-201ENST00000505112 1814 ntBASIC4.14□□□□□ -1.75
CNGA1P29973 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNGA1P29973 Y_RNA.100-201ENST00000363141 102 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 RNA5SP424-201ENST00000390988 115 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.13□□□□□ -1.75
CNGA1P29973 RNU6-1148P-201ENST00000410992 104 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 AC009161.1-201ENST00000417306 376 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.13□□□□□ -1.75
CNGA1P29973 AL353621.1-201ENST00000418219 243 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 AL645937.1-202ENST00000421799 937 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.13□□□□□ -1.75
CNGA1P29973 PRPS1P1-201ENST00000445305 876 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 AC007547.1-201ENST00000462177 490 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 RN7SL93P-201ENST00000463035 293 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 AP001486.1-201ENST00000463339 476 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.13□□□□□ -1.75
CNGA1P29973 RNU6-189P-201ENST00000516120 101 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 SNORA70.14-201ENST00000516205 110 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 RNU6-1314P-201ENST00000517139 104 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.13□□□□□ -1.75
CNGA1P29973 AC025755.1-201ENST00000521306 278 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.13□□□□□ -1.75
CNGA1P29973 AC008011.1-201ENST00000545989 227 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.13□□□□□ -1.75
CNGA1P29973 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.13□□□□□ -1.75
CNGA1P29973 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.13□□□□□ -1.75
CNGA1P29973 LRRC37A5P-203ENST00000580181 585 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 VN1R80P-201ENST00000597126 338 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 AC092747.3-201ENST00000603769 301 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 MIR7851-201ENST00000610611 160 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 AL138880.2-201ENST00000616214 239 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.13□□□□□ -1.75
CNGA1P29973 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.13□□□□□ -1.75
CNGA1P29973 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.13□□□□□ -1.75
CNGA1P29973 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.13□□□□□ -1.75
CNGA1P29973 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CNGA1P29973 CEP170P1-201ENST00000502249 4587 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 AC066616.2-201ENST00000559334 1481 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNGA1P29973 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CNGA1P29973 RNU1-33P-201ENST00000364249 162 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.12□□□□□ -1.75
CNGA1P29973 RNU6-1179P-201ENST00000384667 107 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 RNA5SP219-201ENST00000390940 113 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 MIR888-201ENST00000401186 77 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 RNA5SP38-201ENST00000410750 119 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 RNU6-607P-201ENST00000411283 108 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 AL513185.2-201ENST00000425543 193 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 AC005326.1-201ENST00000429197 123 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 BRK1P2-201ENST00000442875 223 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 ANP32BP2-201ENST00000454525 545 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 AL049873.1-201ENST00000480540 376 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 TRBV12-2-201ENST00000489763 344 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 BTF3L4P4-201ENST00000506381 449 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 MTND3P25-201ENST00000509243 135 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 HIGD1AP13-201ENST00000509878 289 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 FAM206BP-201ENST00000510179 541 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CNGA1P29973 RNU2-27P-201ENST00000516185 142 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.12□□□□□ -1.75
CNGA1P29973 PSMA3P-201ENST00000555485 635 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.12□□□□□ -1.75
CNGA1P29973 MIR3941-201ENST00000582572 103 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 AC005730.3-201ENST00000583067 366 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.12□□□□□ -1.75
CNGA1P29973 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNGA1P29973 MTND4P35-201ENST00000604257 1375 ntBASIC4.12□□□□□ -1.75
CNGA1P29973 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.12□□□□□ -1.75
CNGA1P29973 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CNGA1P29973 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNGA1P29973 MIR412-201ENST00000362142 91 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 SNORD3E-201ENST00000362899 217 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 RPS4XP7-201ENST00000406274 780 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.11□□□□□ -1.75
CNGA1P29973 AC099548.1-201ENST00000421443 426 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 AC017083.1-201ENST00000428093 483 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 AC005300.1-201ENST00000428401 373 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 NEK4P1-201ENST00000433383 879 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 AC098614.3-201ENST00000438957 440 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.11□□□□□ -1.75
CNGA1P29973 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.11□□□□□ -1.75
CNGA1P29973 RPL21P13-201ENST00000488305 481 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 AC098799.2-201ENST00000509466 868 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 RNU6-703P-201ENST00000516946 107 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.11□□□□□ -1.75
CNGA1P29973 TRAV37-201ENST00000553906 342 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.11□□□□□ -1.75
CNGA1P29973 RMST_4.1-201ENST00000616886 107 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.11□□□□□ -1.75
CNGA1P29973 AP000553.6-201ENST00000641242 118 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNGA1P29973 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.11□□□□□ -1.75
CNGA1P29973 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.11□□□□□ -1.75
CNGA1P29973 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CNGA1P29973 AL049781.1-201ENST00000623195 3585 ntBASIC4.11□□□□□ -1.75
CNGA1P29973 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms