Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.6□□□□□ -2.15
COL5A3P25940 MTCO2P25-201ENST00000447065 681 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 VN1R10P-201ENST00000447106 875 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 MTCO1P48-201ENST00000448024 1096 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 RPS29P1-201ENST00000465274 159 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 PABPC1P3-201ENST00000469174 459 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A3P25940 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A3P25940 AC091951.3-201ENST00000504093 246 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A3P25940 MIR514B-201ENST00000516774 80 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 AC090821.2-201ENST00000523552 176 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 AP001189.2-201ENST00000527320 189 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 AC023538.1-201ENST00000534576 736 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 CR383656.7-201ENST00000548164 174 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 MTND4P33-201ENST00000556706 766 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A3P25940 MED28P6-201ENST00000558776 231 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.6□□□□□ -2.15
COL5A3P25940 AC013553.2-201ENST00000604244 589 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 AC013244.3-201ENST00000605614 388 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 AC069545.1-201ENST00000605671 358 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.6□□□□□ -2.15
COL5A3P25940 AC013470.4-201ENST00000619978 986 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 AC023510.2-201ENST00000622162 746 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.6□□□□□ -2.15
COL5A3P25940 CDC27P3-201ENST00000635418 1910 ntBASIC1.6□□□□□ -2.15
COL5A3P25940 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL5A3P25940 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
COL5A3P25940 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
COL5A3P25940 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
COL5A3P25940 RNU6-989P-201ENST00000362756 107 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 SNORD82-201ENST00000365530 70 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 Y_RNA.465-201ENST00000384293 102 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 AL139098.1-201ENST00000407291 389 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 RNA5SP38-201ENST00000410750 119 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 RNU2-32P-201ENST00000411193 191 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.59□□□□□ -2.16
COL5A3P25940 BEND7P1-201ENST00000422058 457 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.59□□□□□ -2.16
COL5A3P25940 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
COL5A3P25940 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.59□□□□□ -2.16
COL5A3P25940 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.59□□□□□ -2.16
COL5A3P25940 BMI1P1-201ENST00000445879 941 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.59□□□□□ -2.16
COL5A3P25940 OR6K5P-201ENST00000447050 945 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.59□□□□□ -2.16
COL5A3P25940 AC108729.1-201ENST00000487812 947 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.59□□□□□ -2.16
COL5A3P25940 AC020699.1-201ENST00000505161 445 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 AC022634.1-201ENST00000520765 532 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.59□□□□□ -2.16
COL5A3P25940 OR5AK1P-201ENST00000524837 922 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 DEFB131D-201ENST00000526803 184 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
COL5A3P25940 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.59□□□□□ -2.16
COL5A3P25940 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.59□□□□□ -2.16
COL5A3P25940 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.59□□□□□ -2.16
COL5A3P25940 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.59□□□□□ -2.16
COL5A3P25940 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.59□□□□□ -2.16
COL5A3P25940 AC022662.1-201ENST00000580252 331 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 COX6CP3-201ENST00000580869 223 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 AC107075.1-201ENST00000613695 314 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 AC083806.3-201ENST00000614016 455 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 AL360181.4-201ENST00000621752 134 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 AC120349.2-201ENST00000625002 298 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.59□□□□□ -2.16
COL5A3P25940 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
COL5A3P25940 GDI2P1-201ENST00000429312 1336 ntBASIC1.59□□□□□ -2.16
COL5A3P25940 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL5A3P25940 RNU4-92P-201ENST00000363783 136 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 Y_RNA.192-201ENST00000363977 102 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 RNU4-68P-201ENST00000364314 141 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 RNU6-657P-201ENST00000383904 107 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 SNORA1.3-201ENST00000384676 136 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 RNU2-15P-201ENST00000410692 191 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.58□□□□□ -2.16
COL5A3P25940 RPS24P7-201ENST00000416921 246 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.58□□□□□ -2.16
COL5A3P25940 TMEM167AP1-201ENST00000423409 219 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 AL590233.1-201ENST00000430017 456 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
COL5A3P25940 COX7BP2-201ENST00000437976 242 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 AC092427.1-201ENST00000439177 601 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.58□□□□□ -2.16
COL5A3P25940 FGF7P5-201ENST00000441829 291 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL5A3P25940 MTND1P16-201ENST00000465177 898 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 AC096751.1-202ENST00000502691 1067 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.58□□□□□ -2.16
COL5A3P25940 HSPE1P23-201ENST00000509838 286 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 RNU5A-4P-201ENST00000516588 111 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 AC019176.1-201ENST00000518519 225 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 ERHP1-201ENST00000523006 310 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 MTCO2P15-201ENST00000532655 656 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 HIGD1AP17-201ENST00000554576 276 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.58□□□□□ -2.16
COL5A3P25940 LARP7P2-201ENST00000575306 125 ntBASIC1.58□□□□□ -2.16
COL5A3P25940 AC025588.2-201ENST00000604851 466 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms