Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC107016.2-201ENST00000547968 190 ntBASIC2.87□□□□□ -1.95
CDH3P22223 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH3P22223 AC245505.1-201ENST00000556398 224 ntBASIC2.87□□□□□ -1.95
CDH3P22223 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH3P22223 AC098826.3-201ENST00000603823 466 ntBASIC2.87□□□□□ -1.95
CDH3P22223 AC104763.2-201ENST00000604179 382 ntBASIC2.87□□□□□ -1.95
CDH3P22223 AL161798.1-201ENST00000604630 131 ntBASIC2.87□□□□□ -1.95
CDH3P22223 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH3P22223 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH3P22223 AL161629.2-201ENST00000615347 275 ntBASIC2.87□□□□□ -1.95
CDH3P22223 AC093648.1-201ENST00000623546 606 ntBASIC2.87□□□□□ -1.95
CDH3P22223 OR5AK4P-201ENST00000635912 903 ntBASIC2.87□□□□□ -1.95
CDH3P22223 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH3P22223 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH3P22223 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH3P22223 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH3P22223 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH3P22223 UBE2L2-201ENST00000254302 429 ntBASIC2.86□□□□□ -1.95
CDH3P22223 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH3P22223 Y_RNA.3-201ENST00000362331 103 ntBASIC2.86□□□□□ -1.95
CDH3P22223 RNU6-270P-201ENST00000364131 105 ntBASIC2.86□□□□□ -1.95
CDH3P22223 RNU6-7-201ENST00000364784 107 ntBASIC2.86□□□□□ -1.95
CDH3P22223 RNU6-8-201ENST00000365467 107 ntBASIC2.86□□□□□ -1.95
CDH3P22223 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDH3P22223 SNORA24.1-201ENST00000384401 135 ntBASIC2.86□□□□□ -1.95
CDH3P22223 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CDH3P22223 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH3P22223 MTCO2P19-201ENST00000427513 598 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.86□□□□□ -1.95
CDH3P22223 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH3P22223 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.86□□□□□ -1.95
CDH3P22223 AC073464.1-201ENST00000429823 534 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH3P22223 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH3P22223 AC079781.2-201ENST00000446424 169 ntBASIC2.86□□□□□ -1.95
CDH3P22223 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH3P22223 AC126389.1-201ENST00000477436 290 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AL160314.1-201ENST00000490836 438 ntBASIC2.86□□□□□ -1.95
CDH3P22223 RPL9P6-201ENST00000492764 598 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AC023194.1-201ENST00000493084 308 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AC083906.5-201ENST00000503722 328 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AC117522.1-201ENST00000509821 380 ntBASIC2.86□□□□□ -1.95
CDH3P22223 RNU6-1282P-201ENST00000516735 96 ntBASIC2.86□□□□□ -1.95
CDH3P22223 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH3P22223 ATP5F1P5-201ENST00000526403 760 ntBASIC2.86□□□□□ -1.95
CDH3P22223 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH3P22223 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH3P22223 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH3P22223 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CDH3P22223 AC034105.3-201ENST00000565294 442 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AMZ2P1-203ENST00000565833 850 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AC146944.4-201ENST00000602697 718 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AC136601.2-201ENST00000604356 474 ntBASIC2.86□□□□□ -1.95
CDH3P22223 Z84480.1-201ENST00000605131 311 ntBASIC2.86□□□□□ -1.95
CDH3P22223 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CDH3P22223 AC007318.2-201ENST00000620999 243 ntBASIC2.86□□□□□ -1.95
CDH3P22223 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH3P22223 AL359740.1-201ENST00000624340 592 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AC009161.2-201ENST00000624626 138 ntBASIC2.86□□□□□ -1.95
CDH3P22223 MTND5P42-201ENST00000637720 498 ntBASIC2.86□□□□□ -1.95
CDH3P22223 MTND5P29-201ENST00000458676 1807 ntBASIC2.86□□□□□ -1.95
CDH3P22223 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH3P22223 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
CDH3P22223 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH3P22223 RNU6-288P-201ENST00000363690 104 ntBASIC2.85□□□□□ -1.95
CDH3P22223 RNU6-198P-201ENST00000384258 104 ntBASIC2.85□□□□□ -1.95
CDH3P22223 MIR634-201ENST00000385208 97 ntBASIC2.85□□□□□ -1.95
CDH3P22223 AL356057.2-201ENST00000403318 432 ntBASIC2.85□□□□□ -1.95
CDH3P22223 RNU4-55P-201ENST00000410731 137 ntBASIC2.85□□□□□ -1.95
CDH3P22223 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDH3P22223 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH3P22223 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDH3P22223 RPL36AP6-201ENST00000435770 321 ntBASIC2.85□□□□□ -1.95
CDH3P22223 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.85□□□□□ -1.95
CDH3P22223 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH3P22223 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH3P22223 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH3P22223 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH3P22223 RNU6-420P-201ENST00000458780 107 ntBASIC2.85□□□□□ -1.95
CDH3P22223 RPL9P33-201ENST00000484311 566 ntBASIC2.85□□□□□ -1.95
CDH3P22223 AIG1P1-201ENST00000503376 148 ntBASIC2.85□□□□□ -1.95
CDH3P22223 AC107401.1-201ENST00000503426 685 ntBASIC2.85□□□□□ -1.95
CDH3P22223 SNORD27.1-201ENST00000516319 72 ntBASIC2.85□□□□□ -1.95
CDH3P22223 RNA5SP291-201ENST00000517222 105 ntBASIC2.85□□□□□ -1.95
CDH3P22223 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH3P22223 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH3P22223 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH3P22223 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH3P22223 EIF4BP1-201ENST00000554881 351 ntBASIC2.85□□□□□ -1.95
CDH3P22223 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH3P22223 AC006504.3-201ENST00000586818 523 ntBASIC2.85□□□□□ -1.95
CDH3P22223 AC025449.1-201ENST00000603896 529 ntBASIC2.85□□□□□ -1.95
CDH3P22223 AP000787.2-201ENST00000604432 568 ntBASIC2.85□□□□□ -1.95
CDH3P22223 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH3P22223 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDH3P22223 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH3P22223 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH3P22223 AC099654.12-201ENST00000639868 649 ntBASIC2.85□□□□□ -1.95
CDH3P22223 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDH3P22223 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms