Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 BNIP3P9-201ENST00000603714 553 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AC007363.1-201ENST00000604736 620 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AC105129.3-201ENST00000605455 485 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 Z99289.3-201ENST00000605586 594 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AC027807.2-201ENST00000616099 408 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AL590808.1-201ENST00000618696 141 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
XRCC1P18887 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
XRCC1P18887 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
XRCC1P18887 AC016717.2-201ENST00000609089 5141 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
XRCC1P18887 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.38□□□□□ -2.03
XRCC1P18887 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 Z82209.1-201ENST00000422141 2135 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 HSPE1P11-201ENST00000339579 310 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 MIR21-201ENST00000362134 72 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 RN7SKP226-201ENST00000364912 300 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 Y_RNA.560-201ENST00000384689 102 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 RNU2-36P-201ENST00000410361 191 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 RPS12P24-201ENST00000412619 387 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 RPS15AP12-201ENST00000419498 388 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.38□□□□□ -2.03
XRCC1P18887 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.38□□□□□ -2.03
XRCC1P18887 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.38□□□□□ -2.03
XRCC1P18887 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.38□□□□□ -2.03
XRCC1P18887 AL133217.1-201ENST00000450980 425 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.38□□□□□ -2.03
XRCC1P18887 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.38□□□□□ -2.03
XRCC1P18887 AC105252.1-201ENST00000503089 286 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.38□□□□□ -2.03
XRCC1P18887 MRPS36P2-201ENST00000512569 299 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 AP003467.2-201ENST00000520175 319 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.38□□□□□ -2.03
XRCC1P18887 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 AC078814.3-201ENST00000553036 491 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.38□□□□□ -2.03
XRCC1P18887 AC027807.1-201ENST00000559921 996 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.38□□□□□ -2.03
XRCC1P18887 AC112191.3-201ENST00000604371 277 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 AL022161.1-201ENST00000604390 213 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
XRCC1P18887 AF246928.1-201ENST00000623768 87 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.38□□□□□ -2.03
XRCC1P18887 MIR3199-2-201ENST00000636243 86 ntBASIC2.38□□□□□ -2.03
XRCC1P18887 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.38□□□□□ -2.03
XRCC1P18887 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
XRCC1P18887 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.37□□□□□ -2.03
XRCC1P18887 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
XRCC1P18887 MTND4P4-201ENST00000439033 1366 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
XRCC1P18887 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
XRCC1P18887 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.37□□□□□ -2.03
XRCC1P18887 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.37□□□□□ -2.03
XRCC1P18887 SNORA80E-201ENST00000384744 137 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 RPS4XP7-201ENST00000406274 780 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AL513475.1-201ENST00000406602 315 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 RNU2-8P-201ENST00000410727 190 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.37□□□□□ -2.03
XRCC1P18887 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.37□□□□□ -2.03
XRCC1P18887 RPS6P15-201ENST00000431996 751 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AC098826.1-201ENST00000433943 471 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AC119618.1-201ENST00000434191 222 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 UBE2D3P4-201ENST00000441973 436 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 OSTCP8-201ENST00000445117 448 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 EPS15P1-201ENST00000448836 336 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 ART2BP-201ENST00000453501 499 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AL139824.2-201ENST00000458731 1095 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.37□□□□□ -2.03
XRCC1P18887 AC109486.1-201ENST00000486833 374 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 RN7SL636P-201ENST00000497504 294 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.37□□□□□ -2.03
XRCC1P18887 NDUFB4P2-201ENST00000509515 391 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AC107222.1-201ENST00000510899 637 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AC022447.1-201ENST00000515358 464 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 RNU7-51P-201ENST00000516560 62 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 RNU6-677P-201ENST00000516914 101 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 SCARNA11.3-201ENST00000517276 130 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.37□□□□□ -2.03
XRCC1P18887 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.37□□□□□ -2.03
XRCC1P18887 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.37□□□□□ -2.03
XRCC1P18887 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.37□□□□□ -2.03
XRCC1P18887 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.37□□□□□ -2.03
XRCC1P18887 PRELID2P1-201ENST00000552837 301 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.37□□□□□ -2.03
XRCC1P18887 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.37□□□□□ -2.03
XRCC1P18887 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.37□□□□□ -2.03
XRCC1P18887 AC007151.1-201ENST00000572774 483 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AC007336.1-201ENST00000576365 3828 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.37□□□□□ -2.03
XRCC1P18887 AC011939.3-201ENST00000613686 466 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 AL589994.2-201ENST00000621124 579 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 MTND5P42-201ENST00000637720 498 ntBASIC2.37□□□□□ -2.03
XRCC1P18887 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
XRCC1P18887 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
XRCC1P18887 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
XRCC1P18887 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.36□□□□□ -2.03
XRCC1P18887 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
XRCC1P18887 NACAP2-201ENST00000318548 624 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms