Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC007256.1-201ENST00000392253 2765 ntBASIC6.17□□□□□ -1.42
CD44P16070 RNU6-644P-201ENST00000391155 98 ntBASIC6.17□□□□□ -1.42
CD44P16070 GPS2P1-201ENST00000411761 986 ntBASIC6.17□□□□□ -1.42
CD44P16070 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.17□□□□□ -1.42
CD44P16070 HLA-DPA3-207ENST00000454398 229 ntBASIC6.17□□□□□ -1.42
CD44P16070 snoU13.3-201ENST00000459441 104 ntBASIC6.17□□□□□ -1.42
CD44P16070 IGKV2D-19-201ENST00000523346 262 ntBASIC6.17□□□□□ -1.42
CD44P16070 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.17□□□□□ -1.42
CD44P16070 AC025574.2-201ENST00000615621 514 ntBASIC6.17□□□□□ -1.42
CD44P16070 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.17□□□□□ -1.42
CD44P16070 RN7SL544P-201ENST00000617232 284 ntBASIC6.17□□□□□ -1.42
CD44P16070 RN7SL763P-201ENST00000620922 284 ntBASIC6.17□□□□□ -1.42
CD44P16070 Six3os1_7.1-201ENST00000621512 201 ntBASIC6.17□□□□□ -1.42
CD44P16070 AP001052.1-201ENST00000626421 99 ntBASIC6.17□□□□□ -1.42
CD44P16070 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD44P16070 AC103988.1-201ENST00000566382 2177 ntBASIC6.17□□□□□ -1.42
CD44P16070 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.17□□□□□ -1.42
CD44P16070 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD44P16070 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.17□□□□□ -1.42
CD44P16070 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC6.17□□□□□ -1.42
CD44P16070 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.17□□□□□ -1.42
CD44P16070 AL450326.2-201ENST00000421913 1962 ntBASIC6.17□□□□□ -1.42
CD44P16070 AL161901.1-201ENST00000624954 3425 ntBASIC6.16□□□□□ -1.42
CD44P16070 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CD44P16070 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.16□□□□□ -1.42
CD44P16070 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD44P16070 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.16□□□□□ -1.42
CD44P16070 AC010329.2-201ENST00000595195 2737 ntBASIC6.16□□□□□ -1.42
CD44P16070 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CD44P16070 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.16□□□□□ -1.42
CD44P16070 SNORA26-201ENST00000391286 122 ntBASIC6.16□□□□□ -1.42
CD44P16070 AL009179.1-201ENST00000406085 265 ntBASIC6.16□□□□□ -1.42
CD44P16070 Y_RNA.601-201ENST00000410500 113 ntBASIC6.16□□□□□ -1.42
CD44P16070 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC6.16□□□□□ -1.42
CD44P16070 AC007919.1-201ENST00000429380 217 ntBASIC6.16□□□□□ -1.42
CD44P16070 AL356867.1-201ENST00000429623 299 ntBASIC6.16□□□□□ -1.42
CD44P16070 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.16□□□□□ -1.42
CD44P16070 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC6.16□□□□□ -1.42
CD44P16070 SNORA31.16-201ENST00000516773 139 ntBASIC6.16□□□□□ -1.42
CD44P16070 AC007751.1-201ENST00000529260 376 ntBASIC6.16□□□□□ -1.42
CD44P16070 AC068205.3-201ENST00000636385 468 ntBASIC6.16□□□□□ -1.42
CD44P16070 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD44P16070 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD44P16070 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.16□□□□□ -1.42
CD44P16070 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.16□□□□□ -1.42
CD44P16070 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CD44P16070 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CD44P16070 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.16□□□□□ -1.42
CD44P16070 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD44P16070 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CD44P16070 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD44P16070 AC100757.1-201ENST00000616872 1835 ntBASIC6.15□□□□□ -1.42
CD44P16070 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CD44P16070 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.15□□□□□ -1.42
CD44P16070 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CD44P16070 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD44P16070 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
CD44P16070 RNA5SP131-201ENST00000365452 119 ntBASIC6.15□□□□□ -1.42
CD44P16070 MIR759-201ENST00000390224 91 ntBASIC6.15□□□□□ -1.42
CD44P16070 EIF4HP2-201ENST00000424380 563 ntBASIC6.15□□□□□ -1.42
CD44P16070 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC6.15□□□□□ -1.42
CD44P16070 AC092017.2-201ENST00000427600 362 ntBASIC6.15□□□□□ -1.42
CD44P16070 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.15□□□□□ -1.42
CD44P16070 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.15□□□□□ -1.42
CD44P16070 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.15□□□□□ -1.42
CD44P16070 RNU7-116P-201ENST00000516940 62 ntBASIC6.15□□□□□ -1.42
CD44P16070 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.15□□□□□ -1.42
CD44P16070 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.15□□□□□ -1.42
CD44P16070 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
CD44P16070 LINC00933-203ENST00000559812 219 ntBASIC6.15□□□□□ -1.42
CD44P16070 AC025281.1-201ENST00000567026 265 ntBASIC6.15□□□□□ -1.42
CD44P16070 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.15□□□□□ -1.42
CD44P16070 AC112484.5-201ENST00000624189 228 ntBASIC6.15□□□□□ -1.42
CD44P16070 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.15□□□□□ -1.42
CD44P16070 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CD44P16070 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CD44P16070 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.15□□□□□ -1.43
CD44P16070 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CD44P16070 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CD44P16070 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CD44P16070 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC6.15□□□□□ -1.43
CD44P16070 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CD44P16070 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CD44P16070 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CD44P16070 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CD44P16070 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC6.15□□□□□ -1.43
CD44P16070 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CD44P16070 DNM1P47-203ENST00000571780 12667 ntBASIC6.15□□□□□ -1.43
CD44P16070 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.15□□□□□ -1.43
CD44P16070 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
CD44P16070 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD44P16070 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CD44P16070 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CD44P16070 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.14□□□□□ -1.43
CD44P16070 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD44P16070 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD44P16070 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CD44P16070 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CD44P16070 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CD44P16070 RN7SKP293-201ENST00000411389 296 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms