Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGB1P09429 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGB1P09429 RNU1-70P-201ENST00000362618 164 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 RNU6-181P-201ENST00000363225 107 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 RNU1-33P-201ENST00000364249 162 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 RNA5SP229-201ENST00000410809 99 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 NUP35P1-201ENST00000422734 947 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGB1P09429 AC079448.1-201ENST00000449377 373 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 RPS29P15-201ENST00000458329 171 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 RNU7-182P-201ENST00000459009 62 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 RN7SL293P-201ENST00000481765 281 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 HMGB1P30-201ENST00000492455 606 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 CKS1BP2-201ENST00000497342 240 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGB1P09429 RNU5B-3P-201ENST00000516601 115 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 RNU6-445P-201ENST00000516949 107 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 AC104027.1-201ENST00000521887 300 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 AP004607.1-201ENST00000524456 203 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 OR4R1P-201ENST00000529879 463 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 AC087752.4-201ENST00000605911 462 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 AC011155.2-201ENST00000623202 216 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 SEPT14P19-203ENST00000633205 211 ntBASIC3.89□□□□□ -1.79
HMGB1P09429 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGB1P09429 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB1P09429 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB1P09429 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB1P09429 RNU6-371P-201ENST00000364283 108 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 MIR454-201ENST00000390180 115 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB1P09429 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB1P09429 MTCYBP5-201ENST00000423752 1135 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 AC236972.1-201ENST00000433225 199 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB1P09429 AC006512.1-201ENST00000468816 291 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB1P09429 AC117522.3-201ENST00000507974 584 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB1P09429 MIR892C-201ENST00000516410 77 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 Y_RNA.687-201ENST00000516558 91 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 RNA5SP503-201ENST00000517047 117 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.88□□□□□ -1.79
HMGB1P09429 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB1P09429 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGB1P09429 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB1P09429 MTCYBP33-201ENST00000575007 1130 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 AC119751.7-201ENST00000600494 245 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 AC005332.10-201ENST00000612725 619 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 AC006133.1-201ENST00000617106 264 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 AC138932.5-201ENST00000617759 563 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 Z99129.2-201ENST00000619967 314 ntBASIC3.88□□□□□ -1.79
HMGB1P09429 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB1P09429 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB1P09429 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGB1P09429 RNA5SP383-201ENST00000362934 120 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 AL353621.1-201ENST00000418219 243 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 AL031667.1-201ENST00000440222 725 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGB1P09429 CALM1P1-201ENST00000442082 433 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGB1P09429 AC073901.1-201ENST00000462471 408 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 DYNLL1P5-201ENST00000467158 270 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 RN7SL442P-201ENST00000473804 320 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGB1P09429 ARL2BPP4-201ENST00000506854 471 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB1P09429 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB1P09429 FAM92A1P1-201ENST00000528023 890 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 AP000873.5-201ENST00000533906 236 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB1P09429 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB1P09429 BNIP3P30-201ENST00000601184 574 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 AC244517.12-201ENST00000623581 663 ntBASIC3.87□□□□□ -1.79
HMGB1P09429 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGB1P09429 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HMGB1P09429 AC073346.2-201ENST00000624724 2058 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 RBBP8P1-201ENST00000449447 1844 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HMGB1P09429 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGB1P09429 RNU6-384P-201ENST00000364900 104 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 MIR490-201ENST00000384865 128 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 RNU6-550P-201ENST00000391057 101 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 BX323014.1-201ENST00000412876 237 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGB1P09429 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGB1P09429 RPS3AP44-201ENST00000425466 790 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGB1P09429 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGB1P09429 AC022364.2-201ENST00000457963 554 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 AC090515.1-201ENST00000465295 476 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 AC133134.1-201ENST00000466800 359 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 MTND3P25-201ENST00000509243 135 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGB1P09429 SNORA64.4-201ENST00000516632 81 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 RNU6-430P-201ENST00000517078 107 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 MTND2P38-201ENST00000522536 667 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 AP003072.2-201ENST00000527756 676 ntBASIC3.86□□□□□ -1.79
HMGB1P09429 AC079598.5-201ENST00000547460 117 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms