Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 IGKV2-26-201ENST00000518305 343 ntBASIC3.66□□□□□ -1.82
RHOP08100 AP000889.1-201ENST00000530968 660 ntBASIC3.66□□□□□ -1.82
RHOP08100 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.66□□□□□ -1.82
RHOP08100 IMMP1LP2-201ENST00000552954 492 ntBASIC3.66□□□□□ -1.82
RHOP08100 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.66□□□□□ -1.82
RHOP08100 AL121821.2-201ENST00000556081 394 ntBASIC3.66□□□□□ -1.82
RHOP08100 AC005951.2-201ENST00000576282 495 ntBASIC3.66□□□□□ -1.82
RHOP08100 MIR3672-201ENST00000584290 82 ntBASIC3.66□□□□□ -1.82
RHOP08100 AP001330.4-201ENST00000604350 154 ntBASIC3.66□□□□□ -1.82
RHOP08100 FAM157A-202ENST00000615155 405 ntBASIC3.66□□□□□ -1.82
RHOP08100 MIR8057-201ENST00000620957 69 ntBASIC3.66□□□□□ -1.82
RHOP08100 AC134503.1-201ENST00000633048 54 ntBASIC3.66□□□□□ -1.82
RHOP08100 AL732372.2-225ENST00000642124 456 ntBASIC3.66□□□□□ -1.82
RHOP08100 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.66□□□□□ -1.82
RHOP08100 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.66□□□□□ -1.82
RHOP08100 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.82
RHOP08100 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
RHOP08100 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RHOP08100 AC116096.1-201ENST00000566804 2314 ntBASIC3.65□□□□□ -1.82
RHOP08100 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RHOP08100 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
RHOP08100 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.65□□□□□ -1.83
RHOP08100 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RHOP08100 RNU6-600P-201ENST00000362524 99 ntBASIC3.65□□□□□ -1.83
RHOP08100 Y_RNA.162-201ENST00000363683 102 ntBASIC3.65□□□□□ -1.83
RHOP08100 RNU6-715P-201ENST00000365204 103 ntBASIC3.65□□□□□ -1.83
RHOP08100 RNU6-43P-201ENST00000384302 107 ntBASIC3.65□□□□□ -1.83
RHOP08100 RNU6-434P-201ENST00000384376 107 ntBASIC3.65□□□□□ -1.83
RHOP08100 RNY4P36-201ENST00000391116 96 ntBASIC3.65□□□□□ -1.83
RHOP08100 CISD1P1-201ENST00000393907 327 ntBASIC3.65□□□□□ -1.83
RHOP08100 HSPE1P26-201ENST00000405341 275 ntBASIC3.65□□□□□ -1.83
RHOP08100 RNU4-14P-201ENST00000410858 122 ntBASIC3.65□□□□□ -1.83
RHOP08100 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.65□□□□□ -1.83
RHOP08100 AL139396.1-201ENST00000421137 167 ntBASIC3.65□□□□□ -1.83
RHOP08100 RPL21P66-201ENST00000426566 466 ntBASIC3.65□□□□□ -1.83
RHOP08100 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.65□□□□□ -1.83
RHOP08100 AF228730.2-201ENST00000438784 848 ntBASIC3.65□□□□□ -1.83
RHOP08100 HMGB3P22-202ENST00000451823 572 ntBASIC3.65□□□□□ -1.83
RHOP08100 RPL21P104-201ENST00000464143 478 ntBASIC3.65□□□□□ -1.83
RHOP08100 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.65□□□□□ -1.83
RHOP08100 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.65□□□□□ -1.83
RHOP08100 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.65□□□□□ -1.83
RHOP08100 RNU6-1170P-201ENST00000515974 106 ntBASIC3.65□□□□□ -1.83
RHOP08100 RNU6-579P-201ENST00000516879 102 ntBASIC3.65□□□□□ -1.83
RHOP08100 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.65□□□□□ -1.83
RHOP08100 COPS8P3-201ENST00000526024 482 ntBASIC3.65□□□□□ -1.83
RHOP08100 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.65□□□□□ -1.83
RHOP08100 AL163153.1-201ENST00000554223 283 ntBASIC3.65□□□□□ -1.83
RHOP08100 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.65□□□□□ -1.83
RHOP08100 AC020661.2-201ENST00000560114 134 ntBASIC3.65□□□□□ -1.83
RHOP08100 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.65□□□□□ -1.83
RHOP08100 MTCO3P13-201ENST00000577757 781 ntBASIC3.65□□□□□ -1.83
RHOP08100 MIR3941-201ENST00000582572 103 ntBASIC3.65□□□□□ -1.83
RHOP08100 DPPA3P3-201ENST00000603842 430 ntBASIC3.65□□□□□ -1.83
RHOP08100 AL670379.10-201ENST00000604330 253 ntBASIC3.65□□□□□ -1.83
RHOP08100 AL670379.9-201ENST00000605428 253 ntBASIC3.65□□□□□ -1.83
RHOP08100 AL133215.3-201ENST00000609801 448 ntBASIC3.65□□□□□ -1.83
RHOP08100 MIR7112-201ENST00000616126 65 ntBASIC3.65□□□□□ -1.83
RHOP08100 AC090971.5-201ENST00000621102 293 ntBASIC3.65□□□□□ -1.83
RHOP08100 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.65□□□□□ -1.83
RHOP08100 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RHOP08100 HSPA8P4-201ENST00000511877 1920 ntBASIC3.65□□□□□ -1.83
RHOP08100 OTUD4P1-201ENST00000237841 3067 ntBASIC3.65□□□□□ -1.83
RHOP08100 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RHOP08100 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RHOP08100 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.64□□□□□ -1.83
RHOP08100 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
RHOP08100 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.64□□□□□ -1.83
RHOP08100 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RHOP08100 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RHOP08100 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.64□□□□□ -1.83
RHOP08100 RNU6-1252P-201ENST00000363054 104 ntBASIC3.64□□□□□ -1.83
RHOP08100 RNA5SP235-201ENST00000365411 114 ntBASIC3.64□□□□□ -1.83
RHOP08100 RNU6-629P-201ENST00000384061 103 ntBASIC3.64□□□□□ -1.83
RHOP08100 MIR128-1-201ENST00000384921 82 ntBASIC3.64□□□□□ -1.83
RHOP08100 Y_RNA.579-201ENST00000390939 94 ntBASIC3.64□□□□□ -1.83
RHOP08100 MTCYBP4-201ENST00000401524 249 ntBASIC3.64□□□□□ -1.83
RHOP08100 RNU2-71P-201ENST00000411395 189 ntBASIC3.64□□□□□ -1.83
RHOP08100 AL591212.2-201ENST00000433923 257 ntBASIC3.64□□□□□ -1.83
RHOP08100 MTND4P19-201ENST00000446659 478 ntBASIC3.64□□□□□ -1.83
RHOP08100 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.64□□□□□ -1.83
RHOP08100 HSPE1P6-201ENST00000479457 291 ntBASIC3.64□□□□□ -1.83
RHOP08100 AC096576.1-201ENST00000489014 359 ntBASIC3.64□□□□□ -1.83
RHOP08100 AC069499.1-201ENST00000489433 509 ntBASIC3.64□□□□□ -1.83
RHOP08100 VN1R104P-201ENST00000505115 1009 ntBASIC3.64□□□□□ -1.83
RHOP08100 HMGB1P22-201ENST00000505315 124 ntBASIC3.64□□□□□ -1.83
RHOP08100 HMGB3P15-201ENST00000507326 574 ntBASIC3.64□□□□□ -1.83
RHOP08100 RPL39P5-202ENST00000512505 151 ntBASIC3.64□□□□□ -1.83
RHOP08100 AC104136.1-201ENST00000512969 394 ntBASIC3.64□□□□□ -1.83
RHOP08100 SNORA14.1-201ENST00000516113 141 ntBASIC3.64□□□□□ -1.83
RHOP08100 RNU6-927P-201ENST00000516199 100 ntBASIC3.64□□□□□ -1.83
RHOP08100 RNU6-1069P-201ENST00000516612 133 ntBASIC3.64□□□□□ -1.83
RHOP08100 SNORA31.20-201ENST00000517111 133 ntBASIC3.64□□□□□ -1.83
RHOP08100 RNU6-1073P-201ENST00000517182 106 ntBASIC3.64□□□□□ -1.83
RHOP08100 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.64□□□□□ -1.83
RHOP08100 AP005639.2-201ENST00000527592 928 ntBASIC3.64□□□□□ -1.83
RHOP08100 MIR4790-201ENST00000577799 79 ntBASIC3.64□□□□□ -1.83
RHOP08100 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.64□□□□□ -1.83
RHOP08100 AL158032.1-201ENST00000605401 106 ntBASIC3.64□□□□□ -1.83
RHOP08100 AL138726.1-201ENST00000614873 333 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms