Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC109925.1-201ENST00000478069 331 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC090096.1-201ENST00000489168 390 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC093303.1-201ENST00000514549 295 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 RNU6-123P-201ENST00000516163 102 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 RNU6-256P-201ENST00000516747 97 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 RNA5SP454-201ENST00000517231 127 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DOAP06340 HMGB3P26-201ENST00000560051 582 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC006270.2-201ENST00000578523 652 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 AP000942.4-201ENST00000604811 241 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 SNHG22-203ENST00000617833 660 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC110801.1-201ENST00000623590 212 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DOAP06340 GABPAP-201ENST00000419271 1356 ntBASIC3.9□□□□□ -1.78
HLA-DOAP06340 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
HLA-DOAP06340 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
HLA-DOAP06340 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DOAP06340 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DOAP06340 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DOAP06340 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DOAP06340 SNORA33.2-201ENST00000365413 134 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HLA-DOAP06340 AL139039.1-201ENST00000401900 692 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 RNU2-43P-201ENST00000410306 190 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 RN7SKP158-201ENST00000410453 326 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 RPL37P10-201ENST00000412884 288 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 AC074085.1-201ENST00000413598 418 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 BX682237.1-201ENST00000415016 335 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 AC113618.1-201ENST00000416747 285 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DOAP06340 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DOAP06340 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DOAP06340 FABP5P13-201ENST00000452144 328 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DOAP06340 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DOAP06340 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DOAP06340 MIR4738-201ENST00000579134 87 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 MIR4325-201ENST00000583049 90 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 AC016925.2-201ENST00000605108 242 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 AC007619.2-201ENST00000605743 379 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 HMGB1P50-201ENST00000605814 607 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 AC019193.3-201ENST00000609144 554 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 uc_338.32-201ENST00000615087 172 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 SNORD39.4-201ENST00000620099 78 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 AL353748.2-201ENST00000622148 471 ntBASIC3.9□□□□□ -1.79
HLA-DOAP06340 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DOAP06340 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DOAP06340 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DOAP06340 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DOAP06340 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DOAP06340 RNU6-1284P-201ENST00000363701 100 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 SNORD113-7-201ENST00000363762 77 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 RNU6-1013P-201ENST00000384180 107 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 SNORA16.2-201ENST00000390991 127 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 SNORA48.5-201ENST00000391143 135 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 NDUFS5P1-201ENST00000405668 289 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 RNU4-46P-201ENST00000410818 138 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 RPL31P12-201ENST00000422587 358 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 PMCHL1-202ENST00000423102 261 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 AL158071.1-201ENST00000430315 461 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 DYNLL1P5-201ENST00000467158 270 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 RPL23AP55-201ENST00000498163 452 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 RNU6-685P-201ENST00000517088 95 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 AC006504.6-201ENST00000590142 199 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 AC008737.2-201ENST00000599446 118 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 AL158032.1-201ENST00000605401 106 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 AL121655.1-201ENST00000605811 308 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 AL355802.3-201ENST00000607571 545 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 FAM157A-202ENST00000615155 405 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 MIR6130-201ENST00000619419 109 ntBASIC3.89□□□□□ -1.79
HLA-DOAP06340 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DOAP06340 PWAR6-201ENST00000552334 4618 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DOAP06340 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DOAP06340 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DOAP06340 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 AL353743.1-202ENST00000431724 1695 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DOAP06340 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DOAP06340 Y_RNA.202-201ENST00000364083 110 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 Y_RNA.212-201ENST00000364177 102 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms