Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL390862.1-201ENST00000635467 1469 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 RNU1-72P-201ENST00000362976 153 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 RNU6-457P-201ENST00000363999 107 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 RNU6-748P-201ENST00000384648 107 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 MTCO1P56-201ENST00000401674 224 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 AL139397.2-201ENST00000404529 772 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 RPS20P15-201ENST00000412792 311 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 NANOGP2-201ENST00000435391 727 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 IFNA20P-201ENST00000436840 528 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 AC020550.1-201ENST00000447385 163 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 RPL23AP3-201ENST00000453844 468 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 MTCO1P42-201ENST00000457379 726 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 MTND5P13-201ENST00000513046 1079 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 RNA5SP165-201ENST00000517142 115 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 DEFB130C-202ENST00000530001 230 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 DUXAP1-201ENST00000556632 463 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 AC104072.1-201ENST00000568817 668 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 MIR3912-201ENST00000577566 105 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 DUSP12P1-201ENST00000612874 516 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 MIR6715A-201ENST00000615929 79 ntBASIC1.5□□□□□ -2.17
HLA-DQB2P05538 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.5□□□□□ -2.17
HLA-DQB2P05538 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 RNU6-223P-201ENST00000362830 107 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 RNU6-1159P-201ENST00000362933 107 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 RNU6-1167P-201ENST00000363227 94 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AL021407.1-201ENST00000404531 386 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AL512604.1-201ENST00000404812 257 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 RNU6-174P-201ENST00000410406 106 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 RNU2-68P-201ENST00000410878 191 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 UBE2FP1-201ENST00000416536 447 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 USP9YP26-201ENST00000421008 661 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AC096920.1-201ENST00000423991 241 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 MTND5P14-201ENST00000441481 1267 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 MTCO3P45-201ENST00000443036 613 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 MTATP6P30-201ENST00000443540 664 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 RPL7P12-201ENST00000446719 750 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 MTND1P31-201ENST00000449206 961 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AP001324.2-201ENST00000461163 319 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 RPL7P18-201ENST00000478965 734 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AC008628.1-201ENST00000508663 265 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AC110760.3-202ENST00000515177 371 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 Y_RNA.675-201ENST00000516389 149 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 RNU6-703P-201ENST00000516946 107 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AC233702.2-202ENST00000562547 291 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 MIR3167-201ENST00000579623 85 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AF038458.1-201ENST00000588406 262 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AC009237.15-201ENST00000610252 501 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AC011939.3-201ENST00000613686 466 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 ADAM3A-203ENST00000461344 2157 ntBASIC1.49□□□□□ -2.17
HLA-DQB2P05538 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DQB2P05538 AC092447.10-201ENST00000620607 1652 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 RNA5SP276-201ENST00000362580 94 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 RNU6-432P-201ENST00000384196 109 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 HMGN2P39-201ENST00000398005 273 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.48□□□□□ -2.17
HLA-DQB2P05538 RPS24P7-201ENST00000416921 246 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 MRPS36P1-201ENST00000421291 307 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AL353729.1-201ENST00000425044 720 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AIMP1P2-201ENST00000425294 312 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DQB2P05538 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AL353689.1-201ENST00000438895 199 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AC020699.1-201ENST00000505161 445 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.48□□□□□ -2.17
HLA-DQB2P05538 RNA5SP137-201ENST00000516833 135 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 MIR4299-201ENST00000577899 72 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms