Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.81□□□□□ -2.12
MT-ND4P03905 RNU6-188P-201ENST00000364207 107 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 RSL24D1P4-201ENST00000400938 484 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AL008987.1-201ENST00000415528 237 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND4P03905 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND4P03905 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.81□□□□□ -2.12
MT-ND4P03905 HMGB1P27-201ENST00000431429 603 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND4P03905 MICF-203ENST00000432679 129 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.81□□□□□ -2.12
MT-ND4P03905 AL161651.1-201ENST00000440882 223 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 HIGD1AP2-201ENST00000446367 280 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AC055731.1-201ENST00000474387 401 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 RPL23AP41-201ENST00000484754 458 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AC068781.1-201ENST00000488231 618 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AC008413.1-201ENST00000511864 177 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND4P03905 SNORD19.2-201ENST00000516978 73 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND4P03905 MTATP6P15-201ENST00000527233 835 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.81□□□□□ -2.12
MT-ND4P03905 AC023050.2-201ENST00000544968 387 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AL356432.3-201ENST00000568952 465 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 MIR3167-201ENST00000579623 85 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.81□□□□□ -2.12
MT-ND4P03905 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.81□□□□□ -2.12
MT-ND4P03905 BNIP3P39-201ENST00000601077 554 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AL358072.1-201ENST00000604156 575 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AL355598.1-201ENST00000604169 202 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AL021997.1-201ENST00000605757 193 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AC108747.1-201ENST00000609508 535 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.81□□□□□ -2.12
MT-ND4P03905 AC021755.4-201ENST00000616620 456 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 MIR6132-201ENST00000622083 109 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
MT-ND4P03905 AC104454.1-201ENST00000421341 1401 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MT-ND4P03905 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
MT-ND4P03905 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.81□□□□□ -2.12
MT-ND4P03905 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
MT-ND4P03905 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MT-ND4P03905 AC006020.1-201ENST00000420179 1854 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 Y_RNA.46-201ENST00000362695 102 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 Y_RNA.302-201ENST00000364997 102 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.8□□□□□ -2.12
MT-ND4P03905 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MT-ND4P03905 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MT-ND4P03905 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.8□□□□□ -2.12
MT-ND4P03905 AL022400.1-201ENST00000423946 935 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.8□□□□□ -2.12
MT-ND4P03905 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.8□□□□□ -2.12
MT-ND4P03905 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.8□□□□□ -2.12
MT-ND4P03905 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.8□□□□□ -2.12
MT-ND4P03905 NEFMP1-201ENST00000443423 1006 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 AL118520.1-201ENST00000450770 291 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.8□□□□□ -2.12
MT-ND4P03905 MTCO1P42-201ENST00000457379 726 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 RNA5SP233-201ENST00000459153 113 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.8□□□□□ -2.12
MT-ND4P03905 SCARNA3-201ENST00000517097 143 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 OR5AQ1P-201ENST00000527596 927 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.8□□□□□ -2.12
MT-ND4P03905 SNRPGP18-201ENST00000553000 214 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 OR11H5P-201ENST00000554039 926 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 AL121821.2-201ENST00000556081 394 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.8□□□□□ -2.12
MT-ND4P03905 ROCK1P1-201ENST00000573767 549 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 AL031281.1-201ENST00000604049 488 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 AC007363.1-201ENST00000604736 620 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 AC090970.3-201ENST00000612566 866 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 SDR42E1P4-201ENST00000620894 481 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 AP002791.1-201ENST00000623291 381 ntBASIC1.8□□□□□ -2.12
MT-ND4P03905 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.8□□□□□ -2.12
MT-ND4P03905 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.8□□□□□ -2.12
MT-ND4P03905 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.8□□□□□ -2.12
MT-ND4P03905 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
MT-ND4P03905 RNU6-288P-201ENST00000363690 104 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 RNY3P13-201ENST00000365542 102 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 RNU6-1200P-201ENST00000384162 107 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 RNA5SP270-201ENST00000411361 118 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AL139413.1-201ENST00000421309 217 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.79□□□□□ -2.12
MT-ND4P03905 RPL30P4-201ENST00000429309 333 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 AL592045.1-201ENST00000429867 352 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.79□□□□□ -2.12
MT-ND4P03905 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
MT-ND4P03905 SCARNA16.3-201ENST00000516595 184 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 SCARNA1-201ENST00000517138 166 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms