Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.54□□□□□ -2.32
SPTA1P02549 AC007038.2-201ENST00000608095 740 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 AC097372.5-201ENST00000623665 376 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 MIR7157-201ENST00000635801 60 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 RNU1-72P-201ENST00000362976 153 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 RNU6-1074P-201ENST00000383995 104 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 RNU6-220P-201ENST00000390919 107 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 MIR1250-201ENST00000408098 113 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 ZNF702P-202ENST00000434269 1966 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.54□□□□□ -2.32
SPTA1P02549 snoU13.4-201ENST00000458916 104 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.54□□□□□ -2.32
SPTA1P02549 AC021146.2-201ENST00000504736 556 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 FAM206BP-201ENST00000510179 541 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.54□□□□□ -2.32
SPTA1P02549 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.54□□□□□ -2.32
SPTA1P02549 AL355802.3-201ENST00000607571 545 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 AL022578.1-201ENST00000439330 1433 ntBASIC0.53□□□□□ -2.32
SPTA1P02549 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.53□□□□□ -2.32
SPTA1P02549 Y_RNA.493-201ENST00000384422 102 ntBASIC0.53□□□□□ -2.32
SPTA1P02549 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.53□□□□□ -2.32
SPTA1P02549 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.53□□□□□ -2.32
SPTA1P02549 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.53□□□□□ -2.32
SPTA1P02549 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.53□□□□□ -2.32
SPTA1P02549 CBX3P3-201ENST00000508108 532 ntBASIC0.53□□□□□ -2.32
SPTA1P02549 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.53□□□□□ -2.32
SPTA1P02549 AC107953.1-201ENST00000522216 297 ntBASIC0.53□□□□□ -2.32
SPTA1P02549 HAUS1P3-201ENST00000523909 662 ntBASIC0.53□□□□□ -2.32
SPTA1P02549 AL133241.1-201ENST00000556832 487 ntBASIC0.53□□□□□ -2.32
SPTA1P02549 MIR3921-201ENST00000577308 85 ntBASIC0.53□□□□□ -2.32
SPTA1P02549 AC021749.1-201ENST00000604322 607 ntBASIC0.53□□□□□ -2.32
SPTA1P02549 AL021997.1-201ENST00000605757 193 ntBASIC0.53□□□□□ -2.32
SPTA1P02549 U6.48-201ENST00000618523 106 ntBASIC0.53□□□□□ -2.32
SPTA1P02549 SNORA22-201ENST00000383907 134 ntBASIC0.53□□□□□ -2.33
SPTA1P02549 SNORA22C-201ENST00000384614 134 ntBASIC0.53□□□□□ -2.33
SPTA1P02549 AL356432.1-201ENST00000405809 419 ntBASIC0.53□□□□□ -2.33
SPTA1P02549 RNA5SP266-201ENST00000410273 108 ntBASIC0.53□□□□□ -2.33
SPTA1P02549 MTND5P15-201ENST00000434246 349 ntBASIC0.53□□□□□ -2.33
SPTA1P02549 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.53□□□□□ -2.33
SPTA1P02549 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.53□□□□□ -2.33
SPTA1P02549 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.53□□□□□ -2.33
SPTA1P02549 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.53□□□□□ -2.33
SPTA1P02549 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.53□□□□□ -2.33
SPTA1P02549 TPT1P8-201ENST00000510120 555 ntBASIC0.53□□□□□ -2.33
SPTA1P02549 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.53□□□□□ -2.33
SPTA1P02549 AC010186.2-204ENST00000537668 439 ntBASIC0.53□□□□□ -2.33
SPTA1P02549 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.53□□□□□ -2.33
SPTA1P02549 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.53□□□□□ -2.33
SPTA1P02549 AC073569.3-201ENST00000619055 682 ntBASIC0.53□□□□□ -2.33
SPTA1P02549 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
SPTA1P02549 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SPTA1P02549 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SPTA1P02549 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
SPTA1P02549 RNU6-1251P-201ENST00000364502 107 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 VN1R36P-201ENST00000414936 291 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.52□□□□□ -2.33
SPTA1P02549 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.52□□□□□ -2.33
SPTA1P02549 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.52□□□□□ -2.33
SPTA1P02549 SNORA31.25-201ENST00000517242 134 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 HSBP1P1-201ENST00000555205 166 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 AC025165.5-201ENST00000602802 578 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 AL592148.2-201ENST00000612210 372 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 AP002791.1-201ENST00000623291 381 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 LINC02211-204ENST00000642024 1070 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 RNU6-98P-201ENST00000384173 107 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.52□□□□□ -2.33
SPTA1P02549 AC024082.2-201ENST00000434771 238 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.52□□□□□ -2.33
SPTA1P02549 RPS27P26-201ENST00000494583 239 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 RPL30P5-201ENST00000494923 336 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.52□□□□□ -2.33
SPTA1P02549 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.52□□□□□ -2.33
SPTA1P02549 AP003355.1-201ENST00000518956 587 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 AC074051.3-201ENST00000570238 358 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 AC115085.1-201ENST00000588924 229 ntBASIC0.52□□□□□ -2.33
SPTA1P02549 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.52□□□□□ -2.33
SPTA1P02549 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.52□□□□□ -2.33
SPTA1P02549 AL513185.3-201ENST00000433335 1300 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 Y_RNA.132-201ENST00000363421 102 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 RNU6-923P-201ENST00000364753 107 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 RNY3-201ENST00000365484 102 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 RNU6-1083P-201ENST00000384022 107 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 U3.29-201ENST00000391296 212 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 MIR1468-201ENST00000410600 86 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 RPL7L1P10-201ENST00000427790 463 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.51□□□□□ -2.33
SPTA1P02549 AC079448.1-201ENST00000449377 373 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 AL590365.1-201ENST00000450788 243 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SPTA1P02549 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SPTA1P02549 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.51□□□□□ -2.33
SPTA1P02549 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SPTA1P02549 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SPTA1P02549 AC078899.2-201ENST00000595282 212 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 MTRNR2L2-201ENST00000604882 87 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 AC016925.2-201ENST00000605108 242 ntBASIC0.51□□□□□ -2.33
SPTA1P02549 RNU6-837P-201ENST00000391056 108 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AC244453.4-201ENST00000419150 388 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms