Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.69□□□□□ -1.98
PDGFBP01127 RPL32P35-201ENST00000415214 394 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 AL353777.1-201ENST00000425552 326 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 HMGB1P27-201ENST00000431429 603 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 FCF1P1-201ENST00000432690 571 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 AC244505.4-201ENST00000434905 287 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 AL022238.1-201ENST00000442557 355 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 SSXP5-201ENST00000443473 287 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 COX6CP2-201ENST00000444980 225 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 OSTCP8-201ENST00000445117 448 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 HIGD1AP2-201ENST00000446367 280 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 UQCRHP3-201ENST00000451503 251 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 RPL21P99-201ENST00000480369 423 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 AC010587.1-201ENST00000505809 469 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 RNA5SP458-201ENST00000516188 119 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.69□□□□□ -1.98
PDGFBP01127 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.69□□□□□ -1.98
PDGFBP01127 AC022878.1-201ENST00000530684 149 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 AP003122.4-201ENST00000530980 758 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.69□□□□□ -1.98
PDGFBP01127 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFBP01127 RPL21P5-201ENST00000554662 472 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFBP01127 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.69□□□□□ -1.98
PDGFBP01127 AC073544.2-201ENST00000601155 540 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 AC007938.3-201ENST00000604965 623 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 AC004805.2-201ENST00000605382 482 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 AL158063.1-201ENST00000615349 536 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.69□□□□□ -1.98
PDGFBP01127 AL589994.2-201ENST00000621124 579 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PDGFBP01127 AC135776.4-201ENST00000624300 1904 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.69□□□□□ -1.98
PDGFBP01127 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFBP01127 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PDGFBP01127 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PDGFBP01127 SNORD116-1-201ENST00000384335 95 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 RPL21P3-201ENST00000395517 478 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AL356057.2-201ENST00000403318 432 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 RNA5SP344-201ENST00000411081 104 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFBP01127 AC127391.1-201ENST00000411737 98 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AC023141.4-201ENST00000412031 328 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.68□□□□□ -1.98
PDGFBP01127 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFBP01127 AC146507.2-201ENST00000460608 476 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AC133134.1-201ENST00000466800 359 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 RNU6-201P-201ENST00000517100 61 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFBP01127 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFBP01127 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFBP01127 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.68□□□□□ -1.98
PDGFBP01127 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFBP01127 HPRT1P3-201ENST00000539521 576 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 ARL2BPP2-201ENST00000550907 489 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFBP01127 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFBP01127 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFBP01127 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFBP01127 AC006362.1-201ENST00000567392 174 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFBP01127 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFBP01127 AC040904.1-201ENST00000590850 223 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AL359999.1-201ENST00000604513 294 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 RNU6-87P-201ENST00000607561 108 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AC098614.4-201ENST00000607601 462 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFBP01127 AL133173.2-201ENST00000614270 90 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AL449363.1-201ENST00000617815 186 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AL353997.5-201ENST00000618886 171 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 PISRT1-201ENST00000626175 531 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PDGFBP01127 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFBP01127 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.68□□□□□ -1.98
PDGFBP01127 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDGFBP01127 AC010329.5-201ENST00000623497 2174 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.68□□□□□ -1.98
PDGFBP01127 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PDGFBP01127 AC092104.1-201ENST00000497346 1441 ntBASIC2.68□□□□□ -1.98
PDGFBP01127 MIR518C-201ENST00000384822 101 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 RNU2-36P-201ENST00000410361 191 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 RNU2-49P-201ENST00000410666 184 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 RNU2-68P-201ENST00000410878 191 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 HMGN1P14-201ENST00000412459 517 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 BX295541.1-201ENST00000417774 250 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 BPY2DP-201ENST00000422208 265 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.67□□□□□ -1.98
PDGFBP01127 AC098826.1-201ENST00000433943 471 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 AL445687.1-201ENST00000439946 251 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 TAF9P1-201ENST00000445421 515 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PDGFBP01127 TAF9P2-201ENST00000454958 515 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.67□□□□□ -1.98
PDGFBP01127 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.67□□□□□ -1.98
PDGFBP01127 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
PDGFBP01127 AC117522.2-201ENST00000510049 657 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.67□□□□□ -1.98
PDGFBP01127 RNU5F-8P-201ENST00000515941 111 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms