Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.61□□□□□ -2.15
CPSF4O95639 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.61□□□□□ -2.15
CPSF4O95639 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.61□□□□□ -2.15
CPSF4O95639 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.61□□□□□ -2.15
CPSF4O95639 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.61□□□□□ -2.15
CPSF4O95639 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.61□□□□□ -2.15
CPSF4O95639 RPS27AP10-201ENST00000496103 208 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.61□□□□□ -2.15
CPSF4O95639 AC092436.1-201ENST00000506450 503 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPSF4O95639 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.61□□□□□ -2.15
CPSF4O95639 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 SCARNA17.1-201ENST00000516211 143 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 SCARNA17.2-201ENST00000516334 143 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 RN7SKP258-201ENST00000517151 304 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.61□□□□□ -2.15
CPSF4O95639 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.61□□□□□ -2.15
CPSF4O95639 AP000907.2-201ENST00000530827 353 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.61□□□□□ -2.15
CPSF4O95639 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.61□□□□□ -2.15
CPSF4O95639 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.61□□□□□ -2.15
CPSF4O95639 MIR3122-201ENST00000577243 73 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 AC011458.1-201ENST00000604034 617 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 AL031281.1-201ENST00000604049 488 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 AC013244.3-201ENST00000605614 388 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 AC091965.4-201ENST00000607691 587 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.61□□□□□ -2.15
CPSF4O95639 AL355472.4-201ENST00000610233 626 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 SCARNA17.4-201ENST00000614296 143 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 AC022960.3-201ENST00000619794 441 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.61□□□□□ -2.15
CPSF4O95639 CENPCP1-201ENST00000533085 2578 ntBASIC1.61□□□□□ -2.15
CPSF4O95639 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPSF4O95639 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CPSF4O95639 RNU4-72P-201ENST00000410754 173 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AL030996.1-201ENST00000411430 235 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.6□□□□□ -2.15
CPSF4O95639 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF4O95639 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF4O95639 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF4O95639 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.6□□□□□ -2.15
CPSF4O95639 MTND1P20-201ENST00000430341 950 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF4O95639 OR6C5P-201ENST00000452388 923 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF4O95639 AC068587.2-201ENST00000478386 781 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 NDUFB4P2-201ENST00000509515 391 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.6□□□□□ -2.15
CPSF4O95639 SNORA31.18-201ENST00000517043 134 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 RNA5SP165-201ENST00000517142 115 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.6□□□□□ -2.15
CPSF4O95639 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.6□□□□□ -2.15
CPSF4O95639 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.6□□□□□ -2.15
CPSF4O95639 AL138976.2-201ENST00000563989 694 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF4O95639 BNIP3P40-201ENST00000596017 556 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.6□□□□□ -2.15
CPSF4O95639 AC098826.3-201ENST00000603823 466 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AC012493.3-201ENST00000604494 112 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AL161798.1-201ENST00000604630 131 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AC107952.2-201ENST00000606048 486 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AC024933.1-201ENST00000608472 348 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.6□□□□□ -2.15
CPSF4O95639 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CPSF4O95639 AC091965.5-201ENST00000624785 342 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF4O95639 U2.21-201ENST00000637295 81 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CPSF4O95639 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CPSF4O95639 AL359851.1-201ENST00000569460 4997 ntBASIC1.6□□□□□ -2.15
CPSF4O95639 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
CPSF4O95639 RNU6-778P-201ENST00000363269 103 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 SNORA38-201ENST00000363946 132 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 Y_RNA.302-201ENST00000364997 102 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 RNU6-750P-201ENST00000390946 107 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AC078974.1-201ENST00000411597 223 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 HMGB1P49-201ENST00000418882 569 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.59□□□□□ -2.15
CPSF4O95639 AL022400.1-201ENST00000423946 935 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.59□□□□□ -2.15
CPSF4O95639 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.59□□□□□ -2.15
CPSF4O95639 UBE2FP3-201ENST00000436366 524 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.59□□□□□ -2.15
CPSF4O95639 RPL7P54-201ENST00000438336 674 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 COX6CP12-201ENST00000446748 202 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.59□□□□□ -2.15
CPSF4O95639 ANKRD26P4-201ENST00000455755 950 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.59□□□□□ -2.15
CPSF4O95639 RPL23AP41-201ENST00000484754 458 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 RPS27P21-201ENST00000486977 252 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AC020699.1-201ENST00000505161 445 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 TPT1P8-201ENST00000510120 555 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AC098591.2-201ENST00000510152 315 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 MTND2P32-201ENST00000521584 1038 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.59□□□□□ -2.15
CPSF4O95639 DEFB108A-201ENST00000530110 222 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AGGF1P5-201ENST00000567900 919 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms