Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC011816.1-201ENST00000441346 546 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.77□□□□□ -1.65
PRPF40AO75400 AC109327.1-201ENST00000471666 403 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF40AO75400 RNA5SP73-201ENST00000516744 108 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 RNA5SP143-201ENST00000516936 115 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.77□□□□□ -1.65
PRPF40AO75400 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.77□□□□□ -1.65
PRPF40AO75400 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.77□□□□□ -1.65
PRPF40AO75400 AC136601.2-201ENST00000604356 474 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 AC113403.1-201ENST00000604910 193 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 AL731566.2-201ENST00000618971 317 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF40AO75400 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF40AO75400 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF40AO75400 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF40AO75400 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PRPF40AO75400 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF40AO75400 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PRPF40AO75400 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF40AO75400 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
PRPF40AO75400 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF40AO75400 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF40AO75400 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.76□□□□□ -1.65
PRPF40AO75400 RNU6-596P-201ENST00000365395 98 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 RNU6-1105P-201ENST00000384774 107 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PRPF40AO75400 RNU6-985P-201ENST00000410182 104 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 SNORD56-201ENST00000413522 71 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.76□□□□□ -1.65
PRPF40AO75400 FTH1P6-201ENST00000430768 320 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF40AO75400 AL512844.2-201ENST00000433990 593 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 AC099799.1-201ENST00000439809 192 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 AC092798.1-201ENST00000458542 409 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 U8.21-201ENST00000459536 136 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 RPL9P32-201ENST00000464118 620 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 RPL30P5-201ENST00000494923 336 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 OR5D17P-201ENST00000531492 978 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 HSPE1P5-201ENST00000561489 272 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.76□□□□□ -1.65
PRPF40AO75400 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.76□□□□□ -1.65
PRPF40AO75400 AC009314.1-201ENST00000603871 304 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 MIR3976-201ENST00000606807 139 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 AC005014.2-201ENST00000607795 599 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 AC004852.3-201ENST00000614131 326 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 FP236240.3-201ENST00000623061 327 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 AC011944.2-201ENST00000624440 683 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 U6.99-201ENST00000637524 83 ntBASIC4.76□□□□□ -1.65
PRPF40AO75400 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF40AO75400 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF40AO75400 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PRPF40AO75400 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF40AO75400 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF40AO75400 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF40AO75400 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40AO75400 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40AO75400 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PRPF40AO75400 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40AO75400 RPL9P7-201ENST00000330965 580 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 RNU1-115P-201ENST00000365329 160 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 RNU6-827P-201ENST00000365553 106 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40AO75400 AC068538.1-201ENST00000376856 336 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 RNU6-166P-201ENST00000384371 107 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 Y_RNA.496-201ENST00000384444 101 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40AO75400 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40AO75400 BX276092.3-201ENST00000424182 230 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 AL358176.2-201ENST00000425769 204 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 AC098614.2-201ENST00000426040 255 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 AC092573.2-201ENST00000434546 243 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 NDUFB4P6-201ENST00000436819 366 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 AL513043.1-201ENST00000439124 535 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40AO75400 PHBP16-201ENST00000446318 950 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 RN7SL98P-201ENST00000462271 300 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 RPL21P104-201ENST00000464143 478 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 RPL9P9-202ENST00000466501 579 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 RPL23AP45-201ENST00000476406 468 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40AO75400 RNU6-764P-201ENST00000516396 105 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 GNRHR2P1-201ENST00000555315 631 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40AO75400 ZNF192P1-203ENST00000565888 810 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF40AO75400 MIR486-1-201ENST00000612171 68 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 MIR6830-201ENST00000636015 70 ntBASIC4.75□□□□□ -1.65
PRPF40AO75400 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40AO75400 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40AO75400 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF40AO75400 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF40AO75400 Y_RNA.133-201ENST00000363428 110 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 RNU6-1317P-201ENST00000364582 104 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 RNU6-140P-201ENST00000384566 108 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 RNU6-174P-201ENST00000410406 106 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 RPS29P17-201ENST00000430795 166 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.74□□□□□ -1.65
PRPF40AO75400 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms