Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC068587.5-201ENST00000528506 175 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB3O75112 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB3O75112 MIR3942-201ENST00000585264 109 ntBASIC3.13□□□□□ -1.91
LDB3O75112 POLR3GP2-201ENST00000588366 668 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AL670379.10-201ENST00000604330 253 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AP001836.1-201ENST00000604675 523 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AL360085.1-201ENST00000604713 532 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AL670379.9-201ENST00000605428 253 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AL627309.6-201ENST00000606857 840 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AC069200.1-201ENST00000609511 323 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AC104237.2-201ENST00000612456 443 ntBASIC3.13□□□□□ -1.91
LDB3O75112 DUSP12P1-201ENST00000612874 516 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AC084757.4-201ENST00000616350 526 ntBASIC3.13□□□□□ -1.91
LDB3O75112 MIR7975-201ENST00000619350 68 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.13□□□□□ -1.91
LDB3O75112 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.13□□□□□ -1.91
LDB3O75112 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LDB3O75112 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.13□□□□□ -1.91
LDB3O75112 AC118273.1-201ENST00000525324 3006 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AF117829.1-206ENST00000621883 3802 ntBASIC3.13□□□□□ -1.91
LDB3O75112 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.12□□□□□ -1.91
LDB3O75112 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.12□□□□□ -1.91
LDB3O75112 AC017071.1-201ENST00000564407 2204 ntBASIC3.12□□□□□ -1.91
LDB3O75112 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LDB3O75112 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LDB3O75112 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LDB3O75112 AC090740.1-201ENST00000623193 2262 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AL139276.1-201ENST00000311910 1001 ntBASIC3.12□□□□□ -1.91
LDB3O75112 Y_RNA.301-201ENST00000364990 103 ntBASIC3.12□□□□□ -1.91
LDB3O75112 Y_RNA.373-201ENST00000365600 103 ntBASIC3.12□□□□□ -1.91
LDB3O75112 Y_RNA.378-201ENST00000365652 113 ntBASIC3.12□□□□□ -1.91
LDB3O75112 SNORD116-29-201ENST00000384516 83 ntBASIC3.12□□□□□ -1.91
LDB3O75112 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LDB3O75112 Y_RNA.579-201ENST00000390939 94 ntBASIC3.12□□□□□ -1.91
LDB3O75112 RNU6-510P-201ENST00000391239 108 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AL590004.1-201ENST00000405321 300 ntBASIC3.12□□□□□ -1.91
LDB3O75112 U3.42-201ENST00000408746 214 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB3O75112 USP9YP20-201ENST00000419224 558 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB3O75112 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB3O75112 HSPE1P1-201ENST00000421494 318 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AL353729.1-201ENST00000425044 720 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AC017083.1-201ENST00000428093 483 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB3O75112 BX679664.1-201ENST00000434429 253 ntBASIC3.12□□□□□ -1.91
LDB3O75112 SETP5-201ENST00000437270 562 ntBASIC3.12□□□□□ -1.91
LDB3O75112 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB3O75112 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB3O75112 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB3O75112 SSXP4-201ENST00000451349 245 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.12□□□□□ -1.91
LDB3O75112 RPL7P49-201ENST00000471402 708 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AC083904.1-201ENST00000487828 231 ntBASIC3.12□□□□□ -1.91
LDB3O75112 FAM206BP-201ENST00000510179 541 ntBASIC3.12□□□□□ -1.91
LDB3O75112 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.12□□□□□ -1.91
LDB3O75112 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.12□□□□□ -1.91
LDB3O75112 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.12□□□□□ -1.91
LDB3O75112 AL355836.1-201ENST00000555951 870 ntBASIC3.12□□□□□ -1.91
LDB3O75112 MIR3921-201ENST00000577308 85 ntBASIC3.12□□□□□ -1.91
LDB3O75112 MIR4703-201ENST00000577728 79 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AC024220.1-201ENST00000603675 484 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AC113139.1-201ENST00000605049 239 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AC093913.1-201ENST00000614178 329 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB3O75112 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
LDB3O75112 AC011155.2-201ENST00000623202 216 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AL359757.2-201ENST00000624309 274 ntBASIC3.12□□□□□ -1.91
LDB3O75112 MTND4LP32-201ENST00000636111 270 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.12□□□□□ -1.91
LDB3O75112 ZNF807-201ENST00000328088 1707 ntBASIC3.12□□□□□ -1.91
LDB3O75112 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LDB3O75112 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LDB3O75112 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LDB3O75112 TNPO1P3-201ENST00000436471 2662 ntBASIC3.12□□□□□ -1.91
LDB3O75112 AL049781.1-201ENST00000623195 3585 ntBASIC3.11□□□□□ -1.91
LDB3O75112 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LDB3O75112 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LDB3O75112 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LDB3O75112 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LDB3O75112 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB3O75112 RNU1-70P-201ENST00000362618 164 ntBASIC3.11□□□□□ -1.91
LDB3O75112 RNU6-474P-201ENST00000384243 107 ntBASIC3.11□□□□□ -1.91
LDB3O75112 NDUFS5P1-201ENST00000405668 289 ntBASIC3.11□□□□□ -1.91
LDB3O75112 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
LDB3O75112 AL451054.2-201ENST00000420896 202 ntBASIC3.11□□□□□ -1.91
LDB3O75112 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.11□□□□□ -1.91
LDB3O75112 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.11□□□□□ -1.91
LDB3O75112 GPM6BP2-201ENST00000432046 144 ntBASIC3.11□□□□□ -1.91
LDB3O75112 RPS3AP52-201ENST00000435639 297 ntBASIC3.11□□□□□ -1.91
LDB3O75112 GPM6BP1-201ENST00000446387 144 ntBASIC3.11□□□□□ -1.91
LDB3O75112 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB3O75112 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.11□□□□□ -1.91
LDB3O75112 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.11□□□□□ -1.91
LDB3O75112 SNORD19B-201ENST00000459623 84 ntBASIC3.11□□□□□ -1.91
LDB3O75112 AC007547.1-201ENST00000462177 490 ntBASIC3.11□□□□□ -1.91
LDB3O75112 RPL21P13-201ENST00000488305 481 ntBASIC3.11□□□□□ -1.91
LDB3O75112 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LDB3O75112 SLC25A15P5-201ENST00000508033 253 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms