Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RN7SL542P-201ENST00000467147 294 ntBASIC2.71□□□□□ -1.98
SNX3O60493 RPS27P26-201ENST00000494583 239 ntBASIC2.71□□□□□ -1.98
SNX3O60493 HMGB1P29-201ENST00000505659 499 ntBASIC2.71□□□□□ -1.98
SNX3O60493 AC104806.1-201ENST00000508720 308 ntBASIC2.71□□□□□ -1.98
SNX3O60493 AC098591.2-201ENST00000510152 315 ntBASIC2.71□□□□□ -1.98
SNX3O60493 RNU6-685P-201ENST00000517088 95 ntBASIC2.71□□□□□ -1.98
SNX3O60493 AC025755.1-201ENST00000521306 278 ntBASIC2.71□□□□□ -1.98
SNX3O60493 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SNX3O60493 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX3O60493 AL157871.3-201ENST00000557231 293 ntBASIC2.71□□□□□ -1.98
SNX3O60493 MIR1273C-201ENST00000578669 77 ntBASIC2.71□□□□□ -1.98
SNX3O60493 AC007684.1-201ENST00000609671 477 ntBASIC2.71□□□□□ -1.98
SNX3O60493 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.71□□□□□ -1.98
SNX3O60493 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.71□□□□□ -1.98
SNX3O60493 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.71□□□□□ -1.98
SNX3O60493 AL731566.2-201ENST00000618971 317 ntBASIC2.71□□□□□ -1.98
SNX3O60493 AC024940.5-201ENST00000622889 474 ntBASIC2.71□□□□□ -1.98
SNX3O60493 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.71□□□□□ -1.98
SNX3O60493 ELF2P3-201ENST00000445099 1506 ntBASIC2.71□□□□□ -1.98
SNX3O60493 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX3O60493 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.7□□□□□ -1.98
SNX3O60493 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX3O60493 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNX3O60493 RNU4-48P-201ENST00000365559 182 ntBASIC2.7□□□□□ -1.98
SNX3O60493 Y_RNA.517-201ENST00000384551 106 ntBASIC2.7□□□□□ -1.98
SNX3O60493 SNORD116-4-201ENST00000384733 96 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AC068050.1-201ENST00000394891 380 ntBASIC2.7□□□□□ -1.98
SNX3O60493 RNU6-1025P-201ENST00000410629 104 ntBASIC2.7□□□□□ -1.98
SNX3O60493 RNA5SP111-201ENST00000411386 101 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX3O60493 AL096701.2-201ENST00000416920 238 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.7□□□□□ -1.98
SNX3O60493 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX3O60493 AC002486.1-201ENST00000435098 391 ntBASIC2.7□□□□□ -1.98
SNX3O60493 RPS15AP5-201ENST00000436276 388 ntBASIC2.7□□□□□ -1.98
SNX3O60493 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.7□□□□□ -1.98
SNX3O60493 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX3O60493 AL162395.1-201ENST00000457882 422 ntBASIC2.7□□□□□ -1.98
SNX3O60493 RPS29P15-201ENST00000458329 171 ntBASIC2.7□□□□□ -1.98
SNX3O60493 RPS29P12-201ENST00000460178 152 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AC006512.1-201ENST00000468816 291 ntBASIC2.7□□□□□ -1.98
SNX3O60493 SRIP1-201ENST00000489235 288 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AC079382.1-201ENST00000493346 557 ntBASIC2.7□□□□□ -1.98
SNX3O60493 RPL37P25-201ENST00000507308 276 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX3O60493 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX3O60493 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
SNX3O60493 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.7□□□□□ -1.98
SNX3O60493 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX3O60493 RANP3-201ENST00000530970 276 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX3O60493 AC135279.1-201ENST00000543493 504 ntBASIC2.7□□□□□ -1.98
SNX3O60493 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX3O60493 AC011611.1-201ENST00000552179 197 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.7□□□□□ -1.98
SNX3O60493 AC010546.1-201ENST00000569391 485 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
SNX3O60493 AC004223.2-201ENST00000590309 544 ntBASIC2.7□□□□□ -1.98
SNX3O60493 DEFB131E-202ENST00000602581 683 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AL355598.1-201ENST00000604169 202 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AL670379.4-201ENST00000605279 254 ntBASIC2.7□□□□□ -1.98
SNX3O60493 HULC.1-201ENST00000612720 240 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AL359740.1-201ENST00000624340 592 ntBASIC2.7□□□□□ -1.98
SNX3O60493 SEPT14P19-203ENST00000633205 211 ntBASIC2.7□□□□□ -1.98
SNX3O60493 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX3O60493 U6.114-201ENST00000636407 96 ntBASIC2.7□□□□□ -1.98
SNX3O60493 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SNX3O60493 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNX3O60493 Y_RNA.1-201ENST00000352915 104 ntBASIC2.69□□□□□ -1.98
SNX3O60493 Y_RNA.33-201ENST00000362591 102 ntBASIC2.69□□□□□ -1.98
SNX3O60493 RNU6-1120P-201ENST00000362988 108 ntBASIC2.69□□□□□ -1.98
SNX3O60493 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
SNX3O60493 RNU1-105P-201ENST00000363470 161 ntBASIC2.69□□□□□ -1.98
SNX3O60493 RNA5SP139-201ENST00000364340 117 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX3O60493 SNORA75B-201ENST00000384053 137 ntBASIC2.69□□□□□ -1.98
SNX3O60493 MIR767-201ENST00000390228 109 ntBASIC2.69□□□□□ -1.98
SNX3O60493 RNA5SP354-201ENST00000391247 136 ntBASIC2.69□□□□□ -1.98
SNX3O60493 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.69□□□□□ -1.98
SNX3O60493 RNU2-49P-201ENST00000410666 184 ntBASIC2.69□□□□□ -1.98
SNX3O60493 RNU4-55P-201ENST00000410731 137 ntBASIC2.69□□□□□ -1.98
SNX3O60493 RNU6-387P-201ENST00000411331 105 ntBASIC2.69□□□□□ -1.98
SNX3O60493 MTCYBP5-201ENST00000423752 1135 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AC098614.2-201ENST00000426040 255 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.69□□□□□ -1.98
SNX3O60493 CR769767.1-201ENST00000436337 346 ntBASIC2.69□□□□□ -1.98
SNX3O60493 DNAJC19P4-201ENST00000440115 345 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.69□□□□□ -1.98
SNX3O60493 BRK1P2-201ENST00000442875 223 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AL358232.1-201ENST00000448030 501 ntBASIC2.69□□□□□ -1.98
SNX3O60493 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.69□□□□□ -1.98
SNX3O60493 MTATP6P7-201ENST00000453315 681 ntBASIC2.69□□□□□ -1.98
SNX3O60493 RNU7-182P-201ENST00000459009 62 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX3O60493 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX3O60493 RPS3AP14-201ENST00000483907 780 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AC011825.1-201ENST00000484967 388 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AC117522.3-201ENST00000507974 584 ntBASIC2.69□□□□□ -1.98
SNX3O60493 RNU6-572P-201ENST00000516724 80 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AC022634.1-201ENST00000520765 532 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms