Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB2O43679 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDB2O43679 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDB2O43679 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDB2O43679 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDB2O43679 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
LDB2O43679 OR4G2P-202ENST00000641004 1759 ntBASIC3.23□□□□□ -1.89
LDB2O43679 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.22□□□□□ -1.89
LDB2O43679 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
LDB2O43679 Y_RNA.166-201ENST00000363730 102 ntBASIC3.22□□□□□ -1.89
LDB2O43679 AL592114.1-201ENST00000403842 483 ntBASIC3.22□□□□□ -1.89
LDB2O43679 AL357075.1-201ENST00000404107 726 ntBASIC3.22□□□□□ -1.89
LDB2O43679 MIR1290-201ENST00000408735 78 ntBASIC3.22□□□□□ -1.89
LDB2O43679 EEF1A1P40-201ENST00000412883 573 ntBASIC3.22□□□□□ -1.89
LDB2O43679 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB2O43679 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB2O43679 MTCO3P46-201ENST00000425787 232 ntBASIC3.22□□□□□ -1.89
LDB2O43679 MTND3P23-201ENST00000431980 347 ntBASIC3.22□□□□□ -1.89
LDB2O43679 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB2O43679 SETP5-201ENST00000437270 562 ntBASIC3.22□□□□□ -1.89
LDB2O43679 HMGB3P8-201ENST00000449709 577 ntBASIC3.22□□□□□ -1.89
LDB2O43679 TRBV1-201ENST00000476502 284 ntBASIC3.22□□□□□ -1.89
LDB2O43679 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.22□□□□□ -1.89
LDB2O43679 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB2O43679 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LDB2O43679 AL359273.1-201ENST00000510918 627 ntBASIC3.22□□□□□ -1.89
LDB2O43679 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.22□□□□□ -1.89
LDB2O43679 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB2O43679 Y_RNA.665-201ENST00000516177 98 ntBASIC3.22□□□□□ -1.89
LDB2O43679 Y_RNA.689-201ENST00000516589 107 ntBASIC3.22□□□□□ -1.89
LDB2O43679 RNU6-1314P-201ENST00000517139 104 ntBASIC3.22□□□□□ -1.89
LDB2O43679 RN7SKP289-201ENST00000517244 295 ntBASIC3.22□□□□□ -1.89
LDB2O43679 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB2O43679 AL138889.2-201ENST00000603883 242 ntBASIC3.22□□□□□ -1.89
LDB2O43679 AP002826.1-201ENST00000608835 315 ntBASIC3.22□□□□□ -1.89
LDB2O43679 AL359314.1-201ENST00000616913 261 ntBASIC3.22□□□□□ -1.89
LDB2O43679 AC091903.1-201ENST00000624322 454 ntBASIC3.22□□□□□ -1.89
LDB2O43679 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.22□□□□□ -1.89
LDB2O43679 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LDB2O43679 AC091152.2-201ENST00000591628 2569 ntBASIC3.22□□□□□ -1.89
LDB2O43679 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.21□□□□□ -1.89
LDB2O43679 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
LDB2O43679 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
LDB2O43679 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LDB2O43679 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB2O43679 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB2O43679 Y_RNA.263-201ENST00000364659 114 ntBASIC3.21□□□□□ -1.9
LDB2O43679 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB2O43679 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
LDB2O43679 RNU6-116P-201ENST00000384042 109 ntBASIC3.21□□□□□ -1.9
LDB2O43679 Y_RNA.615-201ENST00000410769 117 ntBASIC3.21□□□□□ -1.9
LDB2O43679 AC092809.3-201ENST00000415453 231 ntBASIC3.21□□□□□ -1.9
LDB2O43679 AC245291.1-201ENST00000419501 328 ntBASIC3.21□□□□□ -1.9
LDB2O43679 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB2O43679 AL591212.2-201ENST00000433923 257 ntBASIC3.21□□□□□ -1.9
LDB2O43679 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB2O43679 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB2O43679 CYCSP32-201ENST00000440548 321 ntBASIC3.21□□□□□ -1.9
LDB2O43679 RPL7P12-201ENST00000446719 750 ntBASIC3.21□□□□□ -1.9
LDB2O43679 AC104058.1-201ENST00000448028 297 ntBASIC3.21□□□□□ -1.9
LDB2O43679 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB2O43679 AC007547.1-201ENST00000462177 490 ntBASIC3.21□□□□□ -1.9
LDB2O43679 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB2O43679 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB2O43679 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB2O43679 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB2O43679 SCARNA15.2-201ENST00000516409 127 ntBASIC3.21□□□□□ -1.9
LDB2O43679 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.21□□□□□ -1.9
LDB2O43679 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.21□□□□□ -1.9
LDB2O43679 AC243972.3-201ENST00000539655 198 ntBASIC3.21□□□□□ -1.9
LDB2O43679 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB2O43679 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB2O43679 MIR5583-1-201ENST00000580941 59 ntBASIC3.21□□□□□ -1.9
LDB2O43679 AL670379.4-201ENST00000605279 254 ntBASIC3.21□□□□□ -1.9
LDB2O43679 AL158032.1-201ENST00000605401 106 ntBASIC3.21□□□□□ -1.9
LDB2O43679 uc_338.25-201ENST00000613756 156 ntBASIC3.21□□□□□ -1.9
LDB2O43679 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB2O43679 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB2O43679 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB2O43679 AC007256.1-201ENST00000392253 2765 ntBASIC3.21□□□□□ -1.9
LDB2O43679 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDB2O43679 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LDB2O43679 Y_RNA.100-201ENST00000363141 102 ntBASIC3.2□□□□□ -1.9
LDB2O43679 RNU6-288P-201ENST00000363690 104 ntBASIC3.2□□□□□ -1.9
LDB2O43679 RNU6-522P-201ENST00000364497 107 ntBASIC3.2□□□□□ -1.9
LDB2O43679 MT-TD-201ENST00000387419 68 ntBASIC3.2□□□□□ -1.9
LDB2O43679 RNU6-510P-201ENST00000391239 108 ntBASIC3.2□□□□□ -1.9
LDB2O43679 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.2□□□□□ -1.9
LDB2O43679 Z92545.1-201ENST00000411782 234 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AC080125.1-201ENST00000414888 684 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AL645937.1-202ENST00000421799 937 ntBASIC3.2□□□□□ -1.9
LDB2O43679 NDUFB4P7-201ENST00000423198 363 ntBASIC3.2□□□□□ -1.9
LDB2O43679 RPL27AP8-201ENST00000424277 446 ntBASIC3.2□□□□□ -1.9
LDB2O43679 RPL35AP12-201ENST00000425362 338 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AL591704.1-201ENST00000432574 275 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AL353705.1-201ENST00000433468 480 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.2□□□□□ -1.9
LDB2O43679 AC093019.1-201ENST00000443135 252 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AL590639.1-201ENST00000456484 337 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AC087588.1-201ENST00000462203 316 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms