Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 COX6CP5-201ENST00000527162 228 ntBASIC2.36□□□□□ -2.03
MSH4O15457 NACAP3-201ENST00000552100 481 ntBASIC2.36□□□□□ -2.03
MSH4O15457 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH4O15457 AP000860.1-201ENST00000605250 559 ntBASIC2.36□□□□□ -2.03
MSH4O15457 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.36□□□□□ -2.03
MSH4O15457 DUSP12P1-201ENST00000612874 516 ntBASIC2.36□□□□□ -2.03
MSH4O15457 SCARNA17.4-201ENST00000614296 143 ntBASIC2.36□□□□□ -2.03
MSH4O15457 uc_338.12-201ENST00000616344 181 ntBASIC2.36□□□□□ -2.03
MSH4O15457 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH4O15457 AC079416.3-201ENST00000624479 549 ntBASIC2.36□□□□□ -2.03
MSH4O15457 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.36□□□□□ -2.03
MSH4O15457 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.36□□□□□ -2.03
MSH4O15457 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
MSH4O15457 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
MSH4O15457 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
MSH4O15457 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
MSH4O15457 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
MSH4O15457 RNU6-501P-201ENST00000364072 100 ntBASIC2.35□□□□□ -2.03
MSH4O15457 RNU6-461P-201ENST00000364195 107 ntBASIC2.35□□□□□ -2.03
MSH4O15457 RNY4P16-201ENST00000364768 94 ntBASIC2.35□□□□□ -2.03
MSH4O15457 RN7SKP226-201ENST00000364912 300 ntBASIC2.35□□□□□ -2.03
MSH4O15457 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.35□□□□□ -2.03
MSH4O15457 RNU4-26P-201ENST00000410270 107 ntBASIC2.35□□□□□ -2.03
MSH4O15457 RNU2-2P-201ENST00000410396 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 AF274854.1-201ENST00000413236 615 ntBASIC2.35□□□□□ -2.03
MSH4O15457 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH4O15457 RAC1P6-201ENST00000423911 575 ntBASIC2.35□□□□□ -2.03
MSH4O15457 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH4O15457 AC098831.1-201ENST00000440661 216 ntBASIC2.35□□□□□ -2.03
MSH4O15457 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH4O15457 MTND5P2-201ENST00000442927 1142 ntBASIC2.35□□□□□ -2.03
MSH4O15457 AC118469.1-201ENST00000442943 488 ntBASIC2.35□□□□□ -2.03
MSH4O15457 NEFMP1-201ENST00000443423 1006 ntBASIC2.35□□□□□ -2.03
MSH4O15457 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH4O15457 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH4O15457 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.35□□□□□ -2.03
MSH4O15457 AC107626.1-201ENST00000471084 183 ntBASIC2.35□□□□□ -2.03
MSH4O15457 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH4O15457 AC098591.2-201ENST00000510152 315 ntBASIC2.35□□□□□ -2.03
MSH4O15457 AC022616.6-201ENST00000520479 119 ntBASIC2.35□□□□□ -2.03
MSH4O15457 IGKV3-31-201ENST00000523109 329 ntBASIC2.35□□□□□ -2.03
MSH4O15457 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.35□□□□□ -2.03
MSH4O15457 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH4O15457 ARL2BPP2-201ENST00000550907 489 ntBASIC2.35□□□□□ -2.03
MSH4O15457 MRPS36P5-201ENST00000551909 298 ntBASIC2.35□□□□□ -2.03
MSH4O15457 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.35□□□□□ -2.03
MSH4O15457 PCMTD1P2-201ENST00000565017 355 ntBASIC2.35□□□□□ -2.03
MSH4O15457 AC091489.2-201ENST00000566263 604 ntBASIC2.35□□□□□ -2.03
MSH4O15457 MIR4760-201ENST00000585040 80 ntBASIC2.35□□□□□ -2.03
MSH4O15457 AC121334.2-201ENST00000605387 271 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.15-201ENST00000611544 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.16-201ENST00000613119 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.12-201ENST00000613778 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.20-201ENST00000613956 192 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.9-201ENST00000615427 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.11-201ENST00000616345 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.2-201ENST00000616535 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.3-201ENST00000617785 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.35□□□□□ -2.03
MSH4O15457 U2.19-201ENST00000618602 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 RNU2-1-201ENST00000618664 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.6-201ENST00000619225 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.5-201ENST00000619465 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 U2.10-201ENST00000620268 191 ntBASIC2.35□□□□□ -2.03
MSH4O15457 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH4O15457 AL445523.1-201ENST00000451184 1362 ntBASIC2.35□□□□□ -2.03
MSH4O15457 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.03
MSH4O15457 RNU6-500P-201ENST00000362349 107 ntBASIC2.34□□□□□ -2.03
MSH4O15457 RNU5F-6P-201ENST00000362979 116 ntBASIC2.34□□□□□ -2.03
MSH4O15457 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
MSH4O15457 AC096649.2-201ENST00000416186 393 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AL353729.1-201ENST00000425044 720 ntBASIC2.34□□□□□ -2.03
MSH4O15457 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.34□□□□□ -2.03
MSH4O15457 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.34□□□□□ -2.03
MSH4O15457 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.34□□□□□ -2.03
MSH4O15457 AL365184.2-201ENST00000431139 435 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AL445646.1-201ENST00000431784 216 ntBASIC2.34□□□□□ -2.03
MSH4O15457 MTND4P25-201ENST00000441039 533 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AF131216.2-201ENST00000512316 564 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.34□□□□□ -2.03
MSH4O15457 RPPH1-2P-201ENST00000516688 293 ntBASIC2.34□□□□□ -2.03
MSH4O15457 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
MSH4O15457 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.34□□□□□ -2.03
MSH4O15457 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
MSH4O15457 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.34□□□□□ -2.03
MSH4O15457 RPS3AP4-201ENST00000555161 764 ntBASIC2.34□□□□□ -2.03
MSH4O15457 ZNF519P3-201ENST00000557158 1032 ntBASIC2.34□□□□□ -2.03
MSH4O15457 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.34□□□□□ -2.03
MSH4O15457 AC012435.1-202ENST00000568772 240 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.34□□□□□ -2.03
MSH4O15457 AC024619.4-201ENST00000580924 316 ntBASIC2.34□□□□□ -2.03
MSH4O15457 MIR5194-201ENST00000582634 120 ntBASIC2.34□□□□□ -2.03
MSH4O15457 MTCYBP22-201ENST00000603788 447 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AL355598.1-201ENST00000604169 202 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AC007363.1-201ENST00000604736 620 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AC093424.1-201ENST00000604999 338 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AC025594.3-201ENST00000613068 790 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AC006338.1-201ENST00000618453 749 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AL589994.2-201ENST00000621124 579 ntBASIC2.34□□□□□ -2.03
MSH4O15457 AC023510.2-201ENST00000622162 746 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms