Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MIR548S-201ENST00000581352 82 ntBASIC3.42□□□□□ -1.86
PCDH17O14917 HSPE1P7-201ENST00000604681 321 ntBASIC3.42□□□□□ -1.86
PCDH17O14917 RNU6-89P-201ENST00000606519 100 ntBASIC3.42□□□□□ -1.86
PCDH17O14917 DUXAP9-208ENST00000622815 614 ntBASIC3.42□□□□□ -1.86
PCDH17O14917 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDH17O14917 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDH17O14917 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDH17O14917 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDH17O14917 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDH17O14917 AL079305.1-201ENST00000623159 3008 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 AL356274.2-201ENST00000624379 3752 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDH17O14917 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDH17O14917 FRG1CP-201ENST00000358464 769 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDH17O14917 Y_RNA.480-201ENST00000384364 102 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 RN7SKP111-201ENST00000410349 271 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 RNA5SP38-201ENST00000410750 119 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDH17O14917 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDH17O14917 MTCO2P3-201ENST00000442543 421 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 RPL21P23-201ENST00000446654 460 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 RPL12P25-201ENST00000455592 494 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 RPL21P13-201ENST00000488305 481 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 AC026801.1-201ENST00000497178 464 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDH17O14917 AC018710.1-201ENST00000506509 158 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 RNU2-69P-201ENST00000516061 100 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDH17O14917 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDH17O14917 MTCO3P23-201ENST00000561363 289 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.41□□□□□ -1.86
PCDH17O14917 MIR5195-201ENST00000583555 115 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 AL035413.2-201ENST00000604801 525 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 SNORD39.4-201ENST00000620099 78 ntBASIC3.41□□□□□ -1.86
PCDH17O14917 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDH17O14917 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.4□□□□□ -1.86
PCDH17O14917 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDH17O14917 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDH17O14917 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
PCDH17O14917 RNU6-1179P-201ENST00000384667 107 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 RNVU1-14-201ENST00000384770 164 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 MIR578-201ENST00000384828 96 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
PCDH17O14917 SNORA16.2-201ENST00000390991 127 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 SNORA48.8-201ENST00000391324 134 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 RNU6-1077P-201ENST00000410506 102 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 RPL21P90-201ENST00000415692 466 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDH17O14917 AL513185.2-201ENST00000425543 193 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 AC098614.2-201ENST00000426040 255 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDH17O14917 HMGB1P9-201ENST00000429856 646 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDH17O14917 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDH17O14917 AL353572.1-201ENST00000442490 417 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 BRK1P2-201ENST00000442875 223 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 PRPS1P1-201ENST00000445305 876 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDH17O14917 AL360271.2-201ENST00000447710 161 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 CYCSP35-201ENST00000451978 304 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 RNU7-167P-201ENST00000459160 62 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 CCDC34P1-201ENST00000507441 517 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 AC098799.2-201ENST00000509466 868 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 HIGD1AP13-201ENST00000509878 289 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDH17O14917 AC112206.3-201ENST00000514578 389 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 RNU6-189P-201ENST00000516120 101 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 RNU6-928P-201ENST00000516876 104 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDH17O14917 AL163153.1-201ENST00000554223 283 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
PCDH17O14917 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDH17O14917 AC092807.2-201ENST00000609367 243 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 AL442067.2-201ENST00000614033 363 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDH17O14917 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PCDH17O14917 AL732372.2-225ENST00000642124 456 ntBASIC3.4□□□□□ -1.87
PCDH17O14917 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
PCDH17O14917 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDH17O14917 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDH17O14917 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDH17O14917 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDH17O14917 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDH17O14917 AC032011.1-201ENST00000611703 1549 ntBASIC3.39□□□□□ -1.87
PCDH17O14917 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
PCDH17O14917 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
PCDH17O14917 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDH17O14917 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDH17O14917 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDH17O14917 Y_RNA.88-201ENST00000363029 99 ntBASIC3.39□□□□□ -1.87
PCDH17O14917 RNA5SP42-201ENST00000364278 115 ntBASIC3.39□□□□□ -1.87
PCDH17O14917 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDH17O14917 MT-TL1-201ENST00000386347 75 ntBASIC3.39□□□□□ -1.87
PCDH17O14917 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.39□□□□□ -1.87
PCDH17O14917 POLHP1-201ENST00000411806 470 ntBASIC3.39□□□□□ -1.87
PCDH17O14917 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.39□□□□□ -1.87
PCDH17O14917 BX682237.1-201ENST00000415016 335 ntBASIC3.39□□□□□ -1.87
PCDH17O14917 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms