Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 FAM35BP-202ENST00000497389 3337 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM38O00635 MFSD8-236ENST00000641509 4050 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 RPL7P26-201ENST00000333817 754 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 RNU6-179P-201ENST00000363350 107 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 Y_RNA.202-201ENST00000364083 110 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 RNU6-190P-201ENST00000384154 102 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 RNU6-606P-201ENST00000384721 111 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 MIR218-2-201ENST00000385006 110 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TRIM38O00635 RNU6-328P-201ENST00000390887 106 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 ATP5A1P2-201ENST00000412323 255 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM38O00635 AC009310.1-201ENST00000414414 451 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 RPL23AP69-201ENST00000431134 458 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 AL512844.2-201ENST00000433990 593 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 GTF2IP13-201ENST00000438487 386 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 HMGB1P18-201ENST00000438801 619 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 RPS15AP9-201ENST00000439856 381 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 BNIP3P2-201ENST00000441221 577 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM38O00635 DDX3P2-201ENST00000446138 111 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 RPS3AP46-201ENST00000448352 682 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM38O00635 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM38O00635 AC090096.1-201ENST00000489168 390 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM38O00635 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM38O00635 PCBP2P3-201ENST00000509726 843 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 RNU6-123P-201ENST00000516163 102 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 SNORA40.12-201ENST00000516329 111 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 SNORA74D-201ENST00000516404 141 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM38O00635 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM38O00635 HMGB1P6-201ENST00000569046 646 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 AC100830.2-201ENST00000581636 240 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 MIR4503-201ENST00000582187 83 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 AC010525.2-201ENST00000590920 195 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.67□□□□□ -1.82
TRIM38O00635 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM38O00635 AL355598.1-201ENST00000604169 202 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 AL137849.1-201ENST00000604767 169 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 AC016925.2-201ENST00000605108 242 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.67□□□□□ -1.82
TRIM38O00635 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM38O00635 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM38O00635 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM38O00635 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM38O00635 MTND4P14-201ENST00000435799 1354 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 MTND4P35-201ENST00000604257 1375 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 AL079305.1-201ENST00000623159 3008 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM38O00635 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM38O00635 RNU6-1167P-201ENST00000363227 94 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 RNU6-1309P-201ENST00000363305 108 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 RNU6-283P-201ENST00000364788 107 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 RNU4-48P-201ENST00000365559 182 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 Y_RNA.384-201ENST00000383909 102 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 Y_RNA.387-201ENST00000383918 102 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 RNU6-196P-201ENST00000384315 107 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 RNU6-784P-201ENST00000384330 106 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 MIR184-201ENST00000384962 84 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 MIR568-201ENST00000385036 95 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 NDUFB4P5-201ENST00000415445 361 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 AC092047.1-201ENST00000424997 240 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM38O00635 MTATP6P16-201ENST00000434543 526 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM38O00635 IFNA20P-201ENST00000436840 528 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM38O00635 CYCSP35-201ENST00000451978 304 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 RNU6-261P-201ENST00000459506 102 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 AC027575.1-201ENST00000481064 460 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM38O00635 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM38O00635 RNU6-1170P-201ENST00000515974 106 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM38O00635 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM38O00635 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM38O00635 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM38O00635 AC024619.4-201ENST00000580924 316 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 SNORA62.6-201ENST00000606322 83 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM38O00635 AC104237.2-201ENST00000612456 443 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 AL078596.1-201ENST00000624856 447 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM38O00635 AL359693.1-201ENST00000614959 2407 ntBASIC3.66□□□□□ -1.82
TRIM38O00635 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM38O00635 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM38O00635 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM38O00635 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM38O00635 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TRIM38O00635 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
TRIM38O00635 AC103710.2-202ENST00000641454 2853 ntBASIC3.65□□□□□ -1.82
TRIM38O00635 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM38O00635 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.65□□□□□ -1.82
TRIM38O00635 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM38O00635 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM38O00635 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.65□□□□□ -1.82
TRIM38O00635 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms