Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
HMGN4O00479 MTCO1P9-201ENST00000505577 1534 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.7□□□□□ -2.3
HMGN4O00479 ZNF680P1-201ENST00000436625 1469 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
HMGN4O00479 RNU6-884P-201ENST00000363889 107 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 SNORA18.2-201ENST00000383865 132 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 HMGN1P14-201ENST00000412459 517 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.7□□□□□ -2.3
HMGN4O00479 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN4O00479 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN4O00479 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN4O00479 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN4O00479 USP9YP35-201ENST00000435696 412 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 AC098831.1-201ENST00000440661 216 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 DYNLT3P2-201ENST00000442517 295 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.7□□□□□ -2.3
HMGN4O00479 RPL39P29-201ENST00000447779 157 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN4O00479 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN4O00479 CYP2C59P-201ENST00000457790 269 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 AL049874.1-201ENST00000489560 388 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 AC034244.1-201ENST00000507687 207 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN4O00479 AP003497.1-201ENST00000528472 562 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN4O00479 OR5B19P-201ENST00000531766 928 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 RPL21P5-201ENST00000554662 472 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 AC019288.1-201ENST00000557918 224 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 AL731537.2-201ENST00000561565 951 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN4O00479 HSPE1P19-201ENST00000603327 295 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN4O00479 uc_338.14-201ENST00000613162 166 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.7□□□□□ -2.3
HMGN4O00479 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
HMGN4O00479 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN4O00479 AC233981.2-201ENST00000611524 1614 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 MIR96-201ENST00000362288 78 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 RNU6-741P-201ENST00000383889 107 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 RNU6-140P-201ENST00000384566 108 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 PNRC2P1-201ENST00000423940 420 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.69□□□□□ -2.3
HMGN4O00479 TRIM60P13-201ENST00000432350 1283 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.69□□□□□ -2.3
HMGN4O00479 ARPC3P5-201ENST00000448802 534 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN4O00479 RPL39P28-201ENST00000465655 155 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 AC005908.1-201ENST00000468701 347 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN4O00479 AC022483.1-201ENST00000514020 567 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 ZNF705CP-201ENST00000530515 889 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 AC135279.1-201ENST00000543493 504 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN4O00479 CR383656.7-201ENST00000548164 174 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN4O00479 AC005668.1-201ENST00000571142 476 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.69□□□□□ -2.3
HMGN4O00479 AL031176.1-201ENST00000604554 466 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 BX322635.1-201ENST00000605804 496 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 U1.36-201ENST00000620684 176 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.69□□□□□ -2.3
HMGN4O00479 AC110491.1-201ENST00000562191 2010 ntBASIC0.69□□□□□ -2.3
HMGN4O00479 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
HMGN4O00479 SNORA25.8-201ENST00000364831 128 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 MIR515-2-201ENST00000384883 83 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 MIR515-1-201ENST00000384884 83 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 MIR518D-201ENST00000385014 87 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 MIR95-201ENST00000385072 81 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 MIR561-201ENST00000385216 97 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 AL139098.1-201ENST00000407291 389 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 RNU2-47P-201ENST00000410649 186 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 RPL37P10-201ENST00000412884 288 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 AC018630.2-202ENST00000422992 927 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 USP9YP24-201ENST00000434374 697 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 AL161788.1-201ENST00000441805 169 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 AL137159.1-201ENST00000452808 512 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 AC093677.1-201ENST00000514414 678 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 RNU6-902P-201ENST00000517212 91 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.68□□□□□ -2.3
HMGN4O00479 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.68□□□□□ -2.3
HMGN4O00479 NDUFA5P6-201ENST00000542110 379 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.68□□□□□ -2.3
HMGN4O00479 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.68□□□□□ -2.3
HMGN4O00479 AC093510.2-201ENST00000562820 896 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 AC016727.1-205ENST00000605437 569 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.68□□□□□ -2.3
HMGN4O00479 AC108706.1-201ENST00000611053 297 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.68□□□□□ -2.3
HMGN4O00479 AC007490.1-201ENST00000624321 703 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 AP003400.6-201ENST00000624698 740 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 MTND5P9-201ENST00000503854 1755 ntBASIC0.68□□□□□ -2.3
HMGN4O00479 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
HMGN4O00479 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
HMGN4O00479 RNU6-14P-201ENST00000384630 106 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 RNU2-36P-201ENST00000410361 191 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 BTF3P8-201ENST00000414577 526 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms