Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NEDD8-MDP1E9PL57 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AC233263.6-201ENST00000631132 1963 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 UBE2L2-201ENST00000254302 429 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 Y_RNA.22-201ENST00000362492 102 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 CDK8P2-201ENST00000415020 547 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 ELOCP4-201ENST00000420090 333 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 MTCO2P34-201ENST00000421994 607 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 DDX3P2-201ENST00000446138 111 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 FABP5P15-201ENST00000453566 214 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 RPL12P25-201ENST00000455592 494 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 MTND4LP3-201ENST00000468320 276 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 TRBV12-1-201ENST00000479785 344 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 Vault.3-201ENST00000516676 95 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 RNA5SP290-201ENST00000517133 127 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AC090572.1-201ENST00000519251 160 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AC098614.4-201ENST00000607601 462 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AC245008.1-201ENST00000608123 476 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AL365204.3-201ENST00000612448 685 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AC048344.4-201ENST00000619744 527 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AC025034.2-201ENST00000623264 286 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 FRG1KP-201ENST00000623592 341 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 AP003122.6-201ENST00000623831 495 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 CTSLP2-204ENST00000629029 392 ntBASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
NEDD8-MDP1E9PL57 Y_RNA.201-201ENST00000364052 96 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 SNORD56.5-201ENST00000364281 72 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-512P-201ENST00000364438 103 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 Y_RNA.245-201ENST00000364493 95 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-946P-201ENST00000383878 107 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 SNORA20.2-201ENST00000383922 131 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-198P-201ENST00000384258 104 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 SNORA67.4-201ENST00000384688 142 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 DEFB108C-201ENST00000400154 252 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AL139095.1-201ENST00000404326 391 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AC114491.1-201ENST00000416095 246 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 BX295541.1-201ENST00000417774 250 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 ZNF863P-201ENST00000426746 417 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AL365496.1-201ENST00000426885 215 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AC073614.1-201ENST00000438690 650 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 CECR9-201ENST00000453421 199 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AC128713.1-201ENST00000471495 306 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 RPS27AP9-201ENST00000477681 438 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AC138853.1-201ENST00000503549 823 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AC105313.1-201ENST00000509121 353 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 MTCO3P28-201ENST00000513351 515 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU7-51P-201ENST00000516560 62 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AC109329.2-201ENST00000519658 482 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 CKS1BP7-201ENST00000522230 235 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AC104763.2-201ENST00000604179 382 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AP000787.2-201ENST00000604432 568 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AL136363.1-201ENST00000605349 337 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 AL589994.2-201ENST00000621124 579 ntBASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.59□□□□□ -1.99
NEDD8-MDP1E9PL57 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 Y_RNA.359-201ENST00000365498 102 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 MIR518C-201ENST00000384822 101 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 MIR558-201ENST00000384920 94 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 RNU6-817P-201ENST00000391083 104 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 C1DP2-201ENST00000418167 426 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 OOSP1P1-201ENST00000423265 274 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AC104651.1-201ENST00000427559 735 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 KATNBL1P3-201ENST00000443475 909 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AL136380.1-201ENST00000447970 162 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 MTND1P27-201ENST00000451117 902 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 MTCYBP1-201ENST00000454315 1119 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms