Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CFAP99D6REC4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CFAP99D6REC4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CFAP99D6REC4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CFAP99D6REC4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 Y_RNA.23-201ENST00000362496 106 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 SNORA17.1-201ENST00000362945 126 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 RNA5SP90-201ENST00000364801 99 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 Y_RNA.357-201ENST00000365487 109 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 RNU6-898P-201ENST00000365627 104 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 SNORA22C-201ENST00000384614 134 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 RNU6-131P-201ENST00000391144 107 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 RN7SKP229-201ENST00000410465 302 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 RPL26P27-201ENST00000414397 437 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 AC009237.7-201ENST00000447357 229 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 IGLV2-28-201ENST00000520681 304 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 HSPE1P4-201ENST00000550617 308 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 AC055872.1-201ENST00000570978 278 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 MIR4489-201ENST00000578869 62 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 AC084757.4-201ENST00000616350 526 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 AC118658.2-201ENST00000618697 459 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 AC048347.1-201ENST00000624621 427 ntBASIC5.17□□□□□ -1.58
CFAP99D6REC4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CFAP99D6REC4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CFAP99D6REC4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CFAP99D6REC4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CFAP99D6REC4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.16□□□□□ -1.58
CFAP99D6REC4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CFAP99D6REC4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CFAP99D6REC4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CFAP99D6REC4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.16□□□□□ -1.58
CFAP99D6REC4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CFAP99D6REC4 SNORD56.1-201ENST00000362913 68 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 U3.3-201ENST00000362986 216 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 Y_RNA.121-201ENST00000363309 113 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 RNU6-1141P-201ENST00000364520 107 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 RNA5SP455-201ENST00000365190 119 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CFAP99D6REC4 RN7SKP61-201ENST00000410642 295 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.16□□□□□ -1.58
CFAP99D6REC4 CEACAMP7-201ENST00000444105 496 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 RPL37P4-201ENST00000448908 268 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 AL591623.2-201ENST00000449978 222 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.16□□□□□ -1.58
CFAP99D6REC4 AC020593.1-201ENST00000507399 299 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 RNU6-191P-201ENST00000516295 94 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 RNU1-103P-201ENST00000516502 125 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 snoU18.1-201ENST00000629629 71 ntBASIC5.16□□□□□ -1.58
CFAP99D6REC4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CFAP99D6REC4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.16□□□□□ -1.58
CFAP99D6REC4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CFAP99D6REC4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.16□□□□□ -1.58
CFAP99D6REC4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.16□□□□□ -1.58
CFAP99D6REC4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CFAP99D6REC4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
CFAP99D6REC4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CFAP99D6REC4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CFAP99D6REC4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CFAP99D6REC4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CFAP99D6REC4 SRP72P2-201ENST00000344851 1979 ntBASIC5.15□□□□□ -1.58
CFAP99D6REC4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CFAP99D6REC4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CFAP99D6REC4 Y_RNA.215-201ENST00000364204 112 ntBASIC5.15□□□□□ -1.59
CFAP99D6REC4 RNU1-140P-201ENST00000365040 165 ntBASIC5.15□□□□□ -1.59
CFAP99D6REC4 RNU1-43P-201ENST00000365052 165 ntBASIC5.15□□□□□ -1.59
CFAP99D6REC4 AC007969.2-201ENST00000441891 191 ntBASIC5.15□□□□□ -1.59
CFAP99D6REC4 RN7SL346P-201ENST00000491561 294 ntBASIC5.15□□□□□ -1.59
CFAP99D6REC4 AL671862.1-201ENST00000515851 349 ntBASIC5.15□□□□□ -1.59
CFAP99D6REC4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.15□□□□□ -1.59
CFAP99D6REC4 CR383656.8-201ENST00000549046 145 ntBASIC5.15□□□□□ -1.59
CFAP99D6REC4 AC021231.3-201ENST00000558497 370 ntBASIC5.15□□□□□ -1.59
CFAP99D6REC4 AC233702.9-201ENST00000581528 203 ntBASIC5.15□□□□□ -1.59
CFAP99D6REC4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CFAP99D6REC4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.15□□□□□ -1.59
CFAP99D6REC4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.15□□□□□ -1.59
CFAP99D6REC4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CFAP99D6REC4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.15□□□□□ -1.59
CFAP99D6REC4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CFAP99D6REC4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CFAP99D6REC4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CFAP99D6REC4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.15□□□□□ -1.59
CFAP99D6REC4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CFAP99D6REC4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CFAP99D6REC4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CFAP99D6REC4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CFAP99D6REC4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CFAP99D6REC4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CFAP99D6REC4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms