Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 OR2A41P-201ENST00000473586 105 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 AC139453.3-201ENST00000493276 369 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 RPS27P26-201ENST00000494583 239 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 PCNAP1-201ENST00000505363 709 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 RNU6-1004P-201ENST00000516584 111 ntBASIC0.46□□□□□ -2.34
COL6A5A8TX70 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.46□□□□□ -2.34
COL6A5A8TX70 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.46□□□□□ -2.34
COL6A5A8TX70 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.46□□□□□ -2.34
COL6A5A8TX70 AL022578.1-201ENST00000439330 1433 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
COL6A5A8TX70 Y_RNA.493-201ENST00000384422 102 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 RNA5SP252-201ENST00000391131 119 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.45□□□□□ -2.34
COL6A5A8TX70 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.45□□□□□ -2.34
COL6A5A8TX70 RPL39P29-201ENST00000447779 157 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 AC079448.1-201ENST00000449377 373 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
COL6A5A8TX70 RPL30P5-201ENST00000494923 336 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 COX6CP3-201ENST00000580869 223 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 AL355802.3-201ENST00000607571 545 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
COL6A5A8TX70 DUSP12P1-201ENST00000612874 516 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 SNORD49B-201ENST00000365172 72 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 RNU6-46P-201ENST00000383860 107 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 MIR224-201ENST00000384889 81 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 AL606495.1-201ENST00000422100 813 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 AL121578.1-201ENST00000428051 892 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 EIF4EP3-201ENST00000498782 656 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 AC021146.2-201ENST00000504736 556 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 RNU4-77P-201ENST00000516692 156 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 AP005902.1-201ENST00000521358 186 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 OR10V3P-201ENST00000525712 725 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.45□□□□□ -2.34
COL6A5A8TX70 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.45□□□□□ -2.34
COL6A5A8TX70 CYP4A27P-201ENST00000567218 190 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 MIR3198-2-201ENST00000577868 80 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 MIR3616-201ENST00000584070 92 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.45□□□□□ -2.34
COL6A5A8TX70 AC020923.1-201ENST00000624021 917 ntBASIC0.45□□□□□ -2.34
COL6A5A8TX70 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.44□□□□□ -2.34
COL6A5A8TX70 AC083875.1-201ENST00000419509 405 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.44□□□□□ -2.34
COL6A5A8TX70 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
COL6A5A8TX70 AP1S2P1-201ENST00000457344 379 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 snoU13.21-201ENST00000459368 105 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
COL6A5A8TX70 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.44□□□□□ -2.34
COL6A5A8TX70 SNORA22-201ENST00000383907 134 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 SNORA22C-201ENST00000384614 134 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 TRGV6-201ENST00000417928 299 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 AC244453.4-201ENST00000419150 388 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 AC246680.2-201ENST00000422106 389 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.44□□□□□ -2.34
COL6A5A8TX70 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.44□□□□□ -2.34
COL6A5A8TX70 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.44□□□□□ -2.34
COL6A5A8TX70 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.44□□□□□ -2.34
COL6A5A8TX70 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.44□□□□□ -2.34
COL6A5A8TX70 RNU6-491P-201ENST00000516099 110 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 SNORA76.2-201ENST00000517095 137 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 AC025857.1-201ENST00000525252 377 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 AC008751.2-201ENST00000597885 980 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 AL355297.3-201ENST00000604082 446 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 SNORD14A-201ENST00000606526 91 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.44□□□□□ -2.34
COL6A5A8TX70 AC007792.1-201ENST00000623023 402 ntBASIC0.44□□□□□ -2.34
COL6A5A8TX70 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.43□□□□□ -2.34
COL6A5A8TX70 FAM206BP-201ENST00000510179 541 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC104997.1-201ENST00000519761 717 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC025449.1-201ENST00000603896 529 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 PRR13P7-201ENST00000605538 430 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC073111.2-201ENST00000605657 1075 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC007038.2-201ENST00000608095 740 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 AL357075.2-201ENST00000614906 189 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC132825.8-201ENST00000640783 297 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
COL6A5A8TX70 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.43□□□□□ -2.34
COL6A5A8TX70 RPL7P30-201ENST00000420888 709 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 RNF2P1-201ENST00000442955 1010 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC087272.1-201ENST00000523624 533 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.43□□□□□ -2.34
COL6A5A8TX70 DUXAP10-204ENST00000612052 616 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.43□□□□□ -2.34
COL6A5A8TX70 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
COL6A5A8TX70 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
COL6A5A8TX70 AP003476.1-201ENST00000623984 516 ntBASIC0.43□□□□□ -2.34
COL6A5A8TX70 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.43□□□□□ -2.34
COL6A5A8TX70 Y_RNA.536-201ENST00000384621 113 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 ISCA1P1-201ENST00000426679 387 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 SNRPEP7-201ENST00000438350 220 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 HMGB1P38-201ENST00000490557 577 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 AC048346.1-201ENST00000510247 144 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 RNU6-322P-201ENST00000516010 103 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 RNU6-287P-201ENST00000516230 98 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 AP001485.1-201ENST00000604799 199 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 AC135507.1-201ENST00000607214 561 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms