Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 BTF3P15-201ENST00000455606 336 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AC084198.1-201ENST00000477747 402 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 RNU1-95P-201ENST00000516357 160 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 RNU1-128P-201ENST00000516704 160 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 RNA5SP454-201ENST00000517231 127 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AC026403.1-201ENST00000518938 295 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AC104576.1-201ENST00000524225 88 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AC093027.1-201ENST00000546698 429 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AC026371.1-201ENST00000551867 419 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 RNU6-6P-201ENST00000606623 107 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AL391261.4-201ENST00000616012 481 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AL355365.1-201ENST00000616480 294 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AL034408.1-202ENST00000636088 415 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 SRP72P2-201ENST00000344851 1979 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 AC066616.2-201ENST00000559334 1481 ntBASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
MBD3L4A6NDZ8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
MBD3L4A6NDZ8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
MBD3L4A6NDZ8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.4□□□□□ -1.86
MBD3L4A6NDZ8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
MBD3L4A6NDZ8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.4□□□□□ -1.86
MBD3L4A6NDZ8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.4□□□□□ -1.86
MBD3L4A6NDZ8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.4□□□□□ -1.86
MBD3L4A6NDZ8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
MBD3L4A6NDZ8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.86
MBD3L4A6NDZ8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
MBD3L4A6NDZ8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 RNU6-898P-201ENST00000365627 104 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 SNORA5A-201ENST00000384111 134 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AL160275.2-201ENST00000412010 394 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AC093151.1-201ENST00000427711 313 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 SNAP23P1-201ENST00000433229 246 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AC233279.1-201ENST00000455300 423 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AC130509.1-201ENST00000464158 433 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 RPS27AP10-201ENST00000496103 208 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AC026801.1-201ENST00000497178 464 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 HMGN1P11-201ENST00000508668 303 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AP005597.4-201ENST00000526762 229 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 CYCSP39-201ENST00000565821 309 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AL670379.10-201ENST00000604330 253 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AL670379.9-201ENST00000605428 253 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 ATP5A1P2-202ENST00000616464 443 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 MTND5P7-201ENST00000413558 1798 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 AL136164.4-201ENST00000625013 2135 ntBASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MBD3L4A6NDZ8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 Y_RNA.135-201ENST00000363439 95 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 SNORD6-201ENST00000365444 73 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 SNORA9-201ENST00000384215 133 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 RNU6-198P-201ENST00000384258 104 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 MIR483-201ENST00000385070 76 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 AC074085.1-201ENST00000413598 418 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 AC016831.2-201ENST00000417179 352 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 AL590632.1-201ENST00000424289 371 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 RPL7P37-201ENST00000425095 738 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 RPS3AP52-201ENST00000435639 297 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 RPS3AP12-201ENST00000443616 753 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 AL031274.1-201ENST00000450334 232 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 AC092001.1-201ENST00000453012 261 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 AC010469.1-201ENST00000463864 576 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 RPL31P61-201ENST00000496160 376 ntBASIC3.39□□□□□ -1.87
MBD3L4A6NDZ8 RPS27P27-201ENST00000498779 255 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms