Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AL591424.2-201ENST00000617023 128 ntBASIC2.86□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC002076.2-201ENST00000617362 122 ntBASIC2.86□□□□□ -1.95
IGHV4-28A0A0C4DH34 U2.21-201ENST00000637295 81 ntBASIC2.86□□□□□ -1.95
IGHV4-28A0A0C4DH34 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
IGHV4-28A0A0C4DH34 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
IGHV4-28A0A0C4DH34 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC022336.2-201ENST00000568966 2538 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 SNORD62.1-201ENST00000362541 86 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNU6-778P-201ENST00000363269 103 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNA5SP399-201ENST00000364003 117 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNA5SP97-201ENST00000365006 84 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 XGY1-201ENST00000381172 446 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNU1-73P-201ENST00000383971 164 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 Y_RNA.473-201ENST00000384333 102 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC245054.2-201ENST00000415639 319 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 MTCO2P12-201ENST00000427426 682 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AL158071.1-201ENST00000430315 461 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 HMGB3P8-201ENST00000449709 577 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 MRPS31P2-201ENST00000451581 518 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 SNRPGP3-201ENST00000469405 227 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNU6-1183P-201ENST00000517054 60 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNU6-1213P-201ENST00000517075 94 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNU1-54P-201ENST00000517181 120 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC090281.1-201ENST00000523019 276 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 CYCSP39-201ENST00000565821 309 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 MIR5685-201ENST00000579080 79 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 HSPE1P7-201ENST00000604681 321 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AL121917.1-203ENST00000605534 577 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 uc_338.32-201ENST00000615087 172 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC073308.1-201ENST00000623696 305 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 Z69720.2-201ENST00000624755 279 ntBASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
IGHV4-28A0A0C4DH34 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 Y_RNA.138-201ENST00000363462 102 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNU6-1188P-201ENST00000363795 107 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNU6-43P-201ENST00000384302 107 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 SNORA1.3-201ENST00000384676 136 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 MIR554-201ENST00000384874 96 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 MIR888-201ENST00000401186 77 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 MTCYBP4-201ENST00000401524 249 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 SNORA3C-201ENST00000408792 125 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 RN7SKP202-201ENST00000410439 330 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 RNA5SP39-201ENST00000411245 120 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 RPL26P27-201ENST00000414397 437 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AL096701.2-201ENST00000416920 238 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC016831.2-201ENST00000417179 352 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC099548.1-201ENST00000421443 426 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC007389.2-201ENST00000434630 306 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 HIGD1AP11-201ENST00000438361 280 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AL590664.1-201ENST00000448065 339 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 RPL37P4-201ENST00000448908 268 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 FGF7P3-201ENST00000454645 303 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 RPL21P11-201ENST00000461458 483 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 RPL30P14-201ENST00000482744 348 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC018437.1-201ENST00000492214 406 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC020593.1-201ENST00000507399 299 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 Y_RNA.687-201ENST00000516558 91 ntBASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.84□□□□□ -1.95
IGHV4-28A0A0C4DH34 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms