Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.69□□□□□ -2.3
AP4S1Q9Y587 AC012414.6-201ENST00000568241 401 ntBASIC0.69□□□□□ -2.3
AP4S1Q9Y587 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.69□□□□□ -2.3
AP4S1Q9Y587 AL161729.4-201ENST00000604650 476 ntBASIC0.69□□□□□ -2.3
AP4S1Q9Y587 AL355802.3-201ENST00000607571 545 ntBASIC0.69□□□□□ -2.3
AP4S1Q9Y587 AL121890.5-201ENST00000620848 304 ntBASIC0.69□□□□□ -2.3
AP4S1Q9Y587 AL359854.1-201ENST00000614203 1594 ntBASIC0.69□□□□□ -2.3
AP4S1Q9Y587 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.68□□□□□ -2.3
AP4S1Q9Y587 RNU5A-1-201ENST00000362698 116 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 SNORD115-3-201ENST00000363100 82 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 RNA5SP240-201ENST00000365355 128 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 MIR100-201ENST00000385259 80 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 BPY2DP-201ENST00000422208 265 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AL591806.2-201ENST00000433122 173 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AL121890.1-201ENST00000435457 205 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 snoU13.9-201ENST00000458927 103 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.68□□□□□ -2.3
AP4S1Q9Y587 UBL5P1-201ENST00000507979 193 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 SMURF2P1-201ENST00000514992 481 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
AP4S1Q9Y587 HSPA8P13-201ENST00000523715 472 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AC125611.1-201ENST00000549563 229 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AL359212.1-201ENST00000556608 614 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AC080078.3-201ENST00000605407 463 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AC117490.2-201ENST00000610042 594 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AC009318.4-201ENST00000620496 486 ntBASIC0.68□□□□□ -2.3
AP4S1Q9Y587 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.68□□□□□ -2.3
AP4S1Q9Y587 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AL391987.6-201ENST00000305671 199 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
AP4S1Q9Y587 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
AP4S1Q9Y587 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
AP4S1Q9Y587 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
AP4S1Q9Y587 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 RNU6-233P-201ENST00000410845 141 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AC004965.1-201ENST00000413033 213 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 RPS27P16-201ENST00000425758 201 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AL365400.1-201ENST00000431854 640 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 TRIM60P13-201ENST00000432350 1283 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AC244505.3-201ENST00000454598 187 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.67□□□□□ -2.3
AP4S1Q9Y587 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AL049874.1-201ENST00000489560 388 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 SCARNA15.2-201ENST00000516409 127 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AC021739.1-201ENST00000559631 174 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.67□□□□□ -2.3
AP4S1Q9Y587 U1.36-201ENST00000620684 176 ntBASIC0.67□□□□□ -2.3
AP4S1Q9Y587 RBBP8P1-201ENST00000449447 1844 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
AP4S1Q9Y587 MIR1261-201ENST00000408659 82 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 RNU2-43P-201ENST00000410306 190 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 AC069282.1-201ENST00000411911 526 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 BTF3P8-201ENST00000414577 526 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 LINC01347-201ENST00000417964 355 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.66□□□□□ -2.3
AP4S1Q9Y587 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.66□□□□□ -2.3
AP4S1Q9Y587 UBE2V2P3-201ENST00000433562 437 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 MTCO2P20-201ENST00000437339 673 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.66□□□□□ -2.3
AP4S1Q9Y587 AL161788.1-201ENST00000441805 169 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 RPS26P55-201ENST00000471178 356 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
AP4S1Q9Y587 ARL2BPP4-201ENST00000506854 471 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.66□□□□□ -2.3
AP4S1Q9Y587 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.66□□□□□ -2.3
AP4S1Q9Y587 AC117525.1-201ENST00000515228 503 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 CYB5AP5-201ENST00000549779 389 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.66□□□□□ -2.3
AP4S1Q9Y587 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
AP4S1Q9Y587 AC009977.1-201ENST00000586015 570 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 FTX_3.1-201ENST00000610451 147 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.66□□□□□ -2.3
AP4S1Q9Y587 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
AP4S1Q9Y587 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
AP4S1Q9Y587 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
AP4S1Q9Y587 MIR597-201ENST00000384968 97 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 MIR514A1-201ENST00000385133 98 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 MIR561-201ENST00000385216 97 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 RNU11-5P-201ENST00000391216 129 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 MIR888-201ENST00000401186 77 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.65□□□□□ -2.31
AP4S1Q9Y587 RPP40P1-201ENST00000426762 456 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.65□□□□□ -2.31
AP4S1Q9Y587 CYP2C59P-201ENST00000457790 269 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 COX6CP14-201ENST00000469580 174 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 AC079140.2-201ENST00000506193 142 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 AP006587.4-201ENST00000526053 529 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 AC093510.2-201ENST00000562820 896 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 AC005261.5-201ENST00000596280 355 ntBASIC0.65□□□□□ -2.31
AP4S1Q9Y587 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.65□□□□□ -2.31
AP4S1Q9Y587 MIR378A-201ENST00000362177 66 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 RNU6-1222P-201ENST00000384615 107 ntBASIC0.64□□□□□ -2.31
AP4S1Q9Y587 RNU11-3P-201ENST00000391111 133 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms