Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MIR518D-201ENST00000385014 87 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 SNORA40C-201ENST00000391285 128 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 U3.40-201ENST00000408706 208 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 Y_RNA.608-201ENST00000410647 95 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 RPS15AP12-201ENST00000419498 388 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC236972.1-201ENST00000433225 199 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 IPO7P1-201ENST00000442031 636 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AL590365.1-201ENST00000450788 243 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AL139109.1-201ENST00000455491 297 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 SAP18P1-201ENST00000512058 390 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC112673.1-201ENST00000513168 575 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC096725.1-201ENST00000514266 313 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 RNA5SP112-201ENST00000515937 99 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 RNU6-1129P-201ENST00000515964 104 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 SNORA31.19-201ENST00000517079 126 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 MTND1P24-201ENST00000552175 861 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AL157871.3-201ENST00000557231 293 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC008739.3-201ENST00000603262 127 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AL359999.1-201ENST00000604513 294 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 YPEL5P2-201ENST00000605553 359 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AL031775.1-201ENST00000607014 887 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC138749.5-201ENST00000611461 208 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC130324.3-201ENST00000614165 542 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC116165.2-201ENST00000616705 206 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 PISRT1-201ENST00000626175 531 ntBASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
KCNIP3Q9Y2W7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 SNORA38-201ENST00000363946 132 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 SNORA4.3-201ENST00000365564 137 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 RNU6-190P-201ENST00000384154 102 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 SNORA51.11-201ENST00000384442 131 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC092809.3-201ENST00000415453 231 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC003685.2-201ENST00000422795 395 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 WARS2P1-201ENST00000429678 537 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 Z98742.2-201ENST00000431564 187 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 MYL8P-204ENST00000431574 518 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AL078601.1-201ENST00000444542 271 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC003071.1-201ENST00000451219 789 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC093899.1-201ENST00000457984 376 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AL139824.2-201ENST00000458731 1095 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 MTCO2P29-201ENST00000465212 189 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 RPL23AP45-201ENST00000476406 468 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC007182.2-201ENST00000489251 402 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC023194.1-201ENST00000493084 308 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AL358832.1-201ENST00000497800 389 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 HIGD1AP13-201ENST00000509878 289 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 RNU7-51P-201ENST00000516560 62 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 RNA5SP337-201ENST00000517007 109 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AP003122.4-201ENST00000530980 758 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 LINC00933-203ENST00000559812 219 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 RPS3AP23-202ENST00000574601 686 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AL109618.2-201ENST00000605527 211 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC009090.3-201ENST00000616553 565 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC244517.12-201ENST00000623581 663 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC025048.6-202ENST00000627667 438 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 AC073346.2-201ENST00000624724 2058 ntBASIC2.05□□□□□ -2.08
KCNIP3Q9Y2W7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 RNA5SP374-201ENST00000362939 125 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 RNA5SP125-201ENST00000364843 120 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 RNU6-898P-201ENST00000365627 104 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 SNORA18.3-201ENST00000384122 132 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 RNU6-166P-201ENST00000384371 107 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 UBA52P6-201ENST00000399822 382 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 CYCSP48-201ENST00000417124 323 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms