Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.58□□□□□ -2
SMC3Q9UQE7 AL138976.2-201ENST00000563989 694 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 SNORD53-201ENST00000579969 78 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 LRRC37A5P-203ENST00000580181 585 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.58□□□□□ -2
SMC3Q9UQE7 AC103710.1-201ENST00000610003 901 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 AL589743.7-201ENST00000612637 233 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 AC012150.2-201ENST00000621300 544 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMC3Q9UQE7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.58□□□□□ -2
SMC3Q9UQE7 Y_RNA.97-201ENST00000363094 102 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 Y_RNA.560-201ENST00000384689 102 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.57□□□□□ -2
SMC3Q9UQE7 RNU6-220P-201ENST00000390919 107 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 RPL17P12-201ENST00000413391 526 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.57□□□□□ -2
SMC3Q9UQE7 HMGB1P9-201ENST00000429856 646 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 AC098831.1-201ENST00000440661 216 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 RPL7P36-201ENST00000444633 681 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.57□□□□□ -2
SMC3Q9UQE7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.57□□□□□ -2
SMC3Q9UQE7 AL133217.1-201ENST00000450980 425 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 AC010631.1-201ENST00000474150 156 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 AF131216.2-201ENST00000512316 564 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.57□□□□□ -2
SMC3Q9UQE7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.57□□□□□ -2
SMC3Q9UQE7 MTATP6P15-201ENST00000527233 835 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 AP000907.2-201ENST00000530827 353 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 AC093012.1-202ENST00000549403 582 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.57□□□□□ -2
SMC3Q9UQE7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMC3Q9UQE7 AC008015.1-201ENST00000555505 465 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.57□□□□□ -2
SMC3Q9UQE7 AP000403.1-201ENST00000603349 851 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 AC108747.1-201ENST00000609508 535 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.57□□□□□ -2
SMC3Q9UQE7 AC091304.6-201ENST00000619761 202 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 U2.21-201ENST00000637295 81 ntBASIC2.57□□□□□ -2
SMC3Q9UQE7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMC3Q9UQE7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.56□□□□□ -2
SMC3Q9UQE7 AL109809.4-201ENST00000603520 2185 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 SNORA51.11-201ENST00000384442 131 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 RNU6-278P-201ENST00000390945 109 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.56□□□□□ -2
SMC3Q9UQE7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.56□□□□□ -2
SMC3Q9UQE7 WARS2P1-201ENST00000429678 537 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 MICF-203ENST00000432679 129 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.56□□□□□ -2
SMC3Q9UQE7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.56□□□□□ -2
SMC3Q9UQE7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.56□□□□□ -2
SMC3Q9UQE7 MTATP6P30-201ENST00000443540 664 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC020550.1-201ENST00000447385 163 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.56□□□□□ -2
SMC3Q9UQE7 AC013267.1-201ENST00000458227 267 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.56□□□□□ -2
SMC3Q9UQE7 RPL23AP41-201ENST00000484754 458 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC055855.1-201ENST00000489563 579 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC090255.1-201ENST00000495779 349 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 RPS27AP10-201ENST00000496103 208 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC010486.2-201ENST00000505572 483 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 MTND5P13-201ENST00000513046 1079 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC119751.5-201ENST00000514077 770 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 SNORA3.4-201ENST00000515969 96 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 RNU6-927P-201ENST00000516199 100 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC026407.1-201ENST00000518369 204 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AP001646.1-201ENST00000527936 915 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.56□□□□□ -2
SMC3Q9UQE7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.56□□□□□ -2
SMC3Q9UQE7 MIR548AB-201ENST00000584917 84 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC008751.2-201ENST00000597885 980 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AP000811.1-201ENST00000603803 651 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC112187.2-201ENST00000604345 283 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC091965.4-201ENST00000607691 587 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 AC022079.1-201ENST00000621546 602 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
SMC3Q9UQE7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.56□□□□□ -2
SMC3Q9UQE7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.56□□□□□ -2
SMC3Q9UQE7 ELF2P3-201ENST00000445099 1506 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMC3Q9UQE7 AC110491.1-201ENST00000562191 2010 ntBASIC2.56□□□□□ -2
SMC3Q9UQE7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SMC3Q9UQE7 RNY4P24-201ENST00000362735 96 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 RNU6-809P-201ENST00000384461 107 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.55□□□□□ -2
SMC3Q9UQE7 AC078974.1-201ENST00000411597 223 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.55□□□□□ -2
SMC3Q9UQE7 NDUFS5P4-201ENST00000412983 318 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 MED14P1-201ENST00000430517 648 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.55□□□□□ -2
SMC3Q9UQE7 SNRPEP9-201ENST00000436794 238 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 AL445567.1-201ENST00000439121 144 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.55□□□□□ -2
SMC3Q9UQE7 MTCO1P42-201ENST00000457379 726 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 KPNA2P1-201ENST00000458289 1591 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 MTND2P14-201ENST00000482139 351 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 AC109486.1-201ENST00000486833 374 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms