Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AL049555.1-201ENST00000562834 1933 ntBASIC4.65□□□□□ -1.67
PCDHA4Q9UN74 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHA4Q9UN74 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHA4Q9UN74 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 RNU6-395P-201ENST00000365662 106 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 USP9YP7-201ENST00000436723 430 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 USP9YP32-201ENST00000452432 430 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AL583843.1-201ENST00000456070 346 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 FO393415.2-201ENST00000480085 343 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AL121917.1-203ENST00000605534 577 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 RNA5SP108-201ENST00000605921 117 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AC012603.1-201ENST00000606424 528 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 MIR3976-201ENST00000606807 139 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 MIR6715B-201ENST00000637172 77 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 AC233263.6-201ENST00000631132 1963 ntBASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA4Q9UN74 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 Y_RNA.33-201ENST00000362591 102 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 RNU6-1167P-201ENST00000363227 94 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 RNY3P11-201ENST00000364153 102 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 U8.8-201ENST00000365399 135 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 RNU6-933P-201ENST00000384424 107 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 MIR514A1-201ENST00000385133 98 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 LAP3P1-201ENST00000403648 294 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AL513475.1-201ENST00000406602 315 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AL160275.2-201ENST00000412010 394 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 PGBD4P6-201ENST00000421501 610 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 RN7SL271P-201ENST00000487601 295 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AL049874.1-201ENST00000489560 388 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 Y_RNA.687-201ENST00000516558 91 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AC006600.1-201ENST00000572529 153 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AC002545.1-201ENST00000592511 181 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AL161798.1-201ENST00000604630 131 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 MTND4LP5-201ENST00000605152 292 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 MIR6868-201ENST00000611215 58 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AC078938.1-201ENST00000620993 318 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AC112484.5-201ENST00000624189 228 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AL773545.4-201ENST00000637262 310 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AL513478.4-201ENST00000641636 310 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 OR4G2P-202ENST00000641004 1759 ntBASIC4.63□□□□□ -1.67
PCDHA4Q9UN74 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 RLIMP1-201ENST00000339626 1680 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 Y_RNA.214-201ENST00000364201 112 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 Y_RNA.222-201ENST00000364264 102 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 RNU6-629P-201ENST00000384061 103 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 Y_RNA.461-201ENST00000384263 103 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 RNU1-13P-201ENST00000384499 162 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 Y_RNA.551-201ENST00000384661 102 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 AL591034.2-201ENST00000402839 359 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 AL096701.2-201ENST00000416920 238 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 ARL5AP4-201ENST00000430731 512 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 AC091390.1-201ENST00000433904 331 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 RPS3AP12-201ENST00000443616 753 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 MTCO3P8-201ENST00000453691 755 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 RNU6-1037P-201ENST00000459571 107 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 RPL7P5-201ENST00000471472 736 ntBASIC4.62□□□□□ -1.67
PCDHA4Q9UN74 HMGN2P13-201ENST00000476476 274 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms